Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0962 |
Symbol | |
ID | 6145243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 972512 |
End bp | 973330 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641615849 |
Product | glycosy hydrolase family protein |
Protein accession | YP_001743041 |
Protein GI | 170681659 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTGA GAATCACCAG TCGAAAAAAA TTCACCGTTT TATTATGCGC TCTTGGGCTA ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAATT CAGATTAAAG ACTACATCCA CTTCTACGGT TATCGCCCGG TCAAATCTTT TGCTATTCGC ATTCCTGCCA GTTACACCAT TCATGGTATT GATGTTTCAC GCTGGCAGGA GCGAATCGAC TGGCAGCGGG TGGCAAAAAT GCGCGATAAC GGTATTCGCT TACAATTTGC CTTTATTAAG GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC GAAAATGGCC TGCTGCGCGG GGCGTATCAT TATTTCTCCC CGTCGGTATC CGCTTCAGTT CAGGCGCGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTACC TGCCGTGCTG GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG CTAAAAATGG TCGAAAAACG CACGGGAAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT TATCACACGA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT CAACGTCGTC CGGACAATGA CGGCATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGG CAGGTAGATG GCATTAATGG TCCGGTGGAT TTTAATGTGT TTAATGGCAC AGAGGAGGAG TTGCAGGGAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
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Protein sequence | MQLRITSRKK FTVLLCALGL ISIVAIYPRQ TVNFFYSTAI QIKDYIHFYG YRPVKSFAIR IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR ENGLLRGAYH YFSPSVSASV QARLFLQTVD FSQGDLPAVL DVEERGKLSA KELRKRVSQW LKMVEKRTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG QVDGINGPVD FNVFNGTEEE LQGFVDGIKE TP
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