Gene EcSMS35_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0955 
Symbol 
ID6144129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp967055 
End bp967495 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID641615842 
ProductHNH endonuclease family protein 
Protein accessionYP_001743034 
Protein GI170680539 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGC AACCATTAAG GCGATGCACT GAGCCTGGCT GTAATAAGCG CGTGAAGTCC 
GGCAAGTGTG AAGAGCACAG GCGGGCTGCA TGGCGTGCAG AGGATGCCAG ACGGGGACAC
CGCCGCGCGC GCGGGTATTC CCGACAGTGG GACAAATACC GCGCCCTGTA CCTGAGCAAA
AACCCGTTAT GCGTGCGTTG TCTGGCTAAG GGGATTTATA CGCCAGCTCT TGTGGTGGAT
CACATCATTC CCATCAATGG CGGCGGTGAT GTTCTCTTCT GGCCTGAGTG GAATCACCAG
GCATTGTGCC AGACGTGCCA CAACCGTAAG ACGACACGAG AAGATCCAGC CACGAAAGCA
AACCGTAAAG CGGGCATGTA TCGCGAGCAG GAAGAACGGG CGGCACACCG TAACGACTGG
ATGTATGGCG ATGATGACTG A
 
Protein sequence
MPWQPLRRCT EPGCNKRVKS GKCEEHRRAA WRAEDARRGH RRARGYSRQW DKYRALYLSK 
NPLCVRCLAK GIYTPALVVD HIIPINGGGD VLFWPEWNHQ ALCQTCHNRK TTREDPATKA
NRKAGMYREQ EERAAHRNDW MYGDDD