Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0952 |
Symbol | |
ID | 6145323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 964984 |
End bp | 965544 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615839 |
Product | HK97 family phage prohead protease |
Protein accession | YP_001743031 |
Protein GI | 170681758 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA CCGATTTTGA AATCCGCACA TCTGAACTGA CCGCCAGCAA TAAAAAGCTG GTGGGGTATG CCGTTCGCTG GAACAGCCTT TCAGAAATTA TCTGGGACGA ATTCCGCGAA CAGTTCACGC CGGGGGCTTT TGCTGACTAT CTGGCGACGG GTAATGATGT GCGCTGCCTG TATGAGCATG ACTATACCCA ACTGCTGGGG CGCACCAAAT CCGGCACTCT GGTACTGACT GAGGATAACA CCGGGTTACG TTTTGAACTG ACACCGCCGG ATACCCAGCT TGGAAAAGAT GTGCTTACGC TGGTGGAGCG TGGCGACATT ACAGGAATGA GCTTTGGTTT TCGCGCATTA TGCGAGGAGT GGAGTATCGC GCAAAAACCG TATCTGCGTA CCGTAACCGC CGCTGAACTC CGTGAAATCA CAATAACGTC GATGCCTGCT TATCCAGAAT CTGGCGTGGA GATTGCCCAC CGTTCGTTGT TTGCACAGCA CCCTGAATTA CGTCCGACAG GAAATAATCG TCATCGCTGG TCTGAGCTGG CGGGGTTGTG A
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Protein sequence | MKNTDFEIRT SELTASNKKL VGYAVRWNSL SEIIWDEFRE QFTPGAFADY LATGNDVRCL YEHDYTQLLG RTKSGTLVLT EDNTGLRFEL TPPDTQLGKD VLTLVERGDI TGMSFGFRAL CEEWSIAQKP YLRTVTAAEL REITITSMPA YPESGVEIAH RSLFAQHPEL RPTGNNRHRW SELAGL
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