Gene EcSMS35_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0952 
Symbol 
ID6145323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp964984 
End bp965544 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content52% 
IMG OID641615839 
ProductHK97 family phage prohead protease 
Protein accessionYP_001743031 
Protein GI170681758 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CCGATTTTGA AATCCGCACA TCTGAACTGA CCGCCAGCAA TAAAAAGCTG 
GTGGGGTATG CCGTTCGCTG GAACAGCCTT TCAGAAATTA TCTGGGACGA ATTCCGCGAA
CAGTTCACGC CGGGGGCTTT TGCTGACTAT CTGGCGACGG GTAATGATGT GCGCTGCCTG
TATGAGCATG ACTATACCCA ACTGCTGGGG CGCACCAAAT CCGGCACTCT GGTACTGACT
GAGGATAACA CCGGGTTACG TTTTGAACTG ACACCGCCGG ATACCCAGCT TGGAAAAGAT
GTGCTTACGC TGGTGGAGCG TGGCGACATT ACAGGAATGA GCTTTGGTTT TCGCGCATTA
TGCGAGGAGT GGAGTATCGC GCAAAAACCG TATCTGCGTA CCGTAACCGC CGCTGAACTC
CGTGAAATCA CAATAACGTC GATGCCTGCT TATCCAGAAT CTGGCGTGGA GATTGCCCAC
CGTTCGTTGT TTGCACAGCA CCCTGAATTA CGTCCGACAG GAAATAATCG TCATCGCTGG
TCTGAGCTGG CGGGGTTGTG A
 
Protein sequence
MKNTDFEIRT SELTASNKKL VGYAVRWNSL SEIIWDEFRE QFTPGAFADY LATGNDVRCL 
YEHDYTQLLG RTKSGTLVLT EDNTGLRFEL TPPDTQLGKD VLTLVERGDI TGMSFGFRAL
CEEWSIAQKP YLRTVTAAEL REITITSMPA YPESGVEIAH RSLFAQHPEL RPTGNNRHRW
SELAGL