| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0940 |
|---|
| Symbol | |
|---|
| ID | 6146262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 957044 |
|---|
| End bp | 957898 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641615827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743019 |
|---|
| Protein GI | 170682889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.420598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA AAGTAAATAG TAAAAAAGAT TTACCAAAGT CATTTGATTT AGGCAAATAT
GATTGCCTAG AAAACTTGTC GGATAAAGAT CTATTTCGCC AATTATATTG GCGACAAGAT
GATTTAACGA TGAAACATTC TGAGATGCCT GAATATGGAT TTATGTTTGG TGCTGAATAC
CCGTTGCATA ATAATTACGG GGATCCATTT GGAGAGCTGA AAGAAGACGA TTGGTTTTGT
GATAAACAAA AAGAATATGA CCATAAAGTG CAACCGAAGT TAATTGAGCT AAGTTATGAT
GATGGAATTA AACCTGTAAC AAGGTTTGAT ATATCAATGA TTAATAAACT GACTGCGGAA
AGAGGATATT GGAAGGATAA ACCAATCATC ATAGATAATG AGATGGTTGG AAGTTTAATA
TCAGAAGATA ATGGGATGTT TTGGGCTGTG ATGCGTGAAC CAGTGAATCT CCTTTCTGAT
ACATTAGATA ATATGCTTGT TTCTGTTGAC TTACTACATA ACAGAGATGA TGAGTTGATT
GAAGCGTTTA CAAAACTATT ACCAAAATGG CGTAGTGAAC TTTCAATTGT TGAGCCAGAC
AAACCAATTG CAGGAAGTTG GGAGAGCATA CGACGTAAAA TTATTGATTA TAAGATAATC
CCATTAATTG ACTTATTATC TTGGGAGTTG TCTACAGATA GAAAAATTTC ATTAGGGGTG
CTTGCCGTAT CTTTGTATCC TGATGGTGAA AAGGACACCT TTGCTATTGC TCAGACTGTA
AAACCCTTCT TAGAAAAAAT AATGCGCAGC GATTCTTTAG AAAAAATAAG AAAAATGTTA
TCTAATGAAA ATTAA
|
|---|
| Protein sequence | MTKKVNSKKD LPKSFDLGKY DCLENLSDKD LFRQLYWRQD DLTMKHSEMP EYGFMFGAEY
PLHNNYGDPF GELKEDDWFC DKQKEYDHKV QPKLIELSYD DGIKPVTRFD ISMINKLTAE
RGYWKDKPII IDNEMVGSLI SEDNGMFWAV MREPVNLLSD TLDNMLVSVD LLHNRDDELI
EAFTKLLPKW RSELSIVEPD KPIAGSWESI RRKIIDYKII PLIDLLSWEL STDRKISLGV
LAVSLYPDGE KDTFAIAQTV KPFLEKIMRS DSLEKIRKML SNEN
|
|---|
| |