Gene EcSMS35_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0929 
SymbolmetG 
ID6145127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp944684 
End bp946717 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content53% 
IMG OID641615817 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001743009 
Protein GI170681859 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG TCGCGAAGAA AATTCTGGTG ACGTGCGCAC TGCCGTACGC TAACGGCTCA 
ATCCACCTCG GCCATATGCT GGAGCACATC CAGGCTGATG TCTGGGTCCG TTACCAGCGA
ATGCGCGGCC ACGAGGTCAA CTTCATCTGC GCCGACGATG CCCACGGCAC ACCGATCATG
CTGAAAGCTC AGCAGCTCGG TATCACCCCG GAGCAGATGA TTGGCGAAAT GAGTCAGGAG
CATCAGACTG ATTTCGCAGG CTTTAACATC AGCTATGACA ACTATCACTC GACGCACAGC
GAAGAGAACC GCCAGTTGTC AGAACTTATC TACTCTCGCC TGAAAGAAAA CGGTTTTATT
AAAAACCGCA CTATTTCTCA GCTGTACGAT CCGGAAAAAG GCATGTTCCT GCCGGACCGT
TTTGTGAAAG GCACCTGCCC GAAATGTAAA TCCCCGGATC AATACGGCGA TAACTGCGAA
GTCTGCGGCG CGACCTACAG CCCGACTGAA TTGATCGAGC CGAAATCGGT GGTTTCTGGC
GCTACGCCGG TAATGCGTGA TTCTGAACAC TTCTTCTTTG ATCTGCCCTC TTTCAGCGAA
ATGTTGCAGG CATGGACCCG CAGCGGTGCG TTGCAGGAGC AGGTGGCAAA TAAAATGCAG
GAGTGGTTTG AATCCGGCCT GCAACAGTGG GATATCTCCC GCGACGCCCC TTATTTCGGT
TTTGAAATTC CGAACGCGCC GGGCAAATAT TTCTATGTCT GGCTGGACGC ACCGATTGGC
TATATGGGCT CTTTCAAGAA TCTGTGTGAT AAGCGCGGCG ACAGCGTAAG CTTCGATGAA
TACTGGAAGA AAGATTCCAC TGCCGAGCTG TATCACTTCA TCGGTAAAGA TATCGTTTAC
TTCCACAGCC TGTTCTGGCC AGCAATGCTG GAAGGCAGCA ACTTCCGCAA GCCGACCAAC
CTGTTTGTTC ATGGCTATGT GACGGTGAAC GGCGCGAAGA TGTCTAAGTC TCGCGGTACC
TTTATTAAGG CCAGCACCTG GCTGAATCAT TTTGACGCCG ACAGCCTGCG TTACTACTAC
ACTGCGAAAC TCTCTTCGCG CATTGATGAT ATCGATCTCA ACCTGGAAGA TTTCGTTCAG
CGCGTGAATG CCGATATCGT TAACAAAGTG GTTAACCTGG CCTCCCGTAA TGCAGGCTTT
ATCAACAAAC GTTTTGACGG CGTGCTGGCA AGCGAACTGG CTGACCCGCA GTTGTACAAA
ACCTTCACTG ATGCCGCTGA AGTGATTGGT GAAGCGTGGG AAAGCCGCGA ATTTGGTAAA
GCAGTGCGCG AAATCATGGC GCTGGCTGAT CTGGCTAACC GCTATGTCGA TGAACAGGCT
CCGTGGGTGG TGGCAAAACA GGAAGGCCGC GATGCCGACC TGCAGGCAAT TTGCTCAATG
GGCATAAACC TGTTCCGCGT GCTGATGACT TACCTGAAGC CGGTACTGCC GAAACTGACC
GAGCGCGCAG AAGCATTCCT CAATACAGAA CTGACCTGGG ATGGTATCCA GCAACCGCTG
CTGGGCCACA AAGTGAATCC GTTCAAAGCG CTGTATAACC GCATCGATAT GAAGCAGGTT
GAAGCACTGG TGGAAGCGTC TAAAGAAGAA GTGAAAGCAG CTGCCGCGCC AGTTACTGGC
CCACTGGCAG ATGATCCGAT TCAGGAAACC ATCACCTTTG ACGACTTCGC CAAAGTTGAC
CTGCGCGTGG CGCTGATCGA AAACGCAGAG TTTGTTGAAG GTTCTGACAA ACTGCTGCGC
CTGACGCTGG ATCTCGGCGG TGAAAAACGC AATGTCTTCT CCGGCATTCG TTCTGCTTAC
CCGGATCCGC AGGCACTGAT TGGTCGTCAC ACCATTATGG TGGCTAACCT GGCACCACGT
AAAATGCGCT TCGGTATCTC CGAAGGCATG GTGATGGCTG CCGGTCCTGG CGGGAAAGAT
ATCTTCCTGC TAAGCCCGGA TGCCGGTGCT AAACCGGGTC ATCAGGTGAA ATAA
 
Protein sequence
MTQVAKKILV TCALPYANGS IHLGHMLEHI QADVWVRYQR MRGHEVNFIC ADDAHGTPIM 
LKAQQLGITP EQMIGEMSQE HQTDFAGFNI SYDNYHSTHS EENRQLSELI YSRLKENGFI
KNRTISQLYD PEKGMFLPDR FVKGTCPKCK SPDQYGDNCE VCGATYSPTE LIEPKSVVSG
ATPVMRDSEH FFFDLPSFSE MLQAWTRSGA LQEQVANKMQ EWFESGLQQW DISRDAPYFG
FEIPNAPGKY FYVWLDAPIG YMGSFKNLCD KRGDSVSFDE YWKKDSTAEL YHFIGKDIVY
FHSLFWPAML EGSNFRKPTN LFVHGYVTVN GAKMSKSRGT FIKASTWLNH FDADSLRYYY
TAKLSSRIDD IDLNLEDFVQ RVNADIVNKV VNLASRNAGF INKRFDGVLA SELADPQLYK
TFTDAAEVIG EAWESREFGK AVREIMALAD LANRYVDEQA PWVVAKQEGR DADLQAICSM
GINLFRVLMT YLKPVLPKLT ERAEAFLNTE LTWDGIQQPL LGHKVNPFKA LYNRIDMKQV
EALVEASKEE VKAAAAPVTG PLADDPIQET ITFDDFAKVD LRVALIENAE FVEGSDKLLR
LTLDLGGEKR NVFSGIRSAY PDPQALIGRH TIMVANLAPR KMRFGISEGM VMAAGPGGKD
IFLLSPDAGA KPGHQVK