Gene EcSMS35_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0924 
Symbol 
ID6142862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp932748 
End bp935027 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content55% 
IMG OID641615812 
Producthypothetical protein 
Protein accessionYP_001743004 
Protein GI170684260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.504013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CGTTAATTGT CGGCATCCGG CATCATAGTC CGGCCTGCGC CCGGCTGGTG 
AAATCGTTAA TCGAAAGCCA GCGGCCACGA TACGTGTTGA TTGAAGGCCC GGCTGATTTT
AATGACCGGG TAGACGAACT GTTGTTAGCC CACCAGCTTC CGGTAGCTAT TTACAGTTAT
TGCCAGTATC AGGACGGTGC AGCCCCCGGG CGTGGTGCCT GGACGCCATT TGCTGAATTT
TCGCCGGAGT GGCAGGCGCT ACAAGCCGCA CGTCGTATTC AGGCACAAAC TTACTTCATC
GATTTGCCTT GCTGGGCACA AAGTGAAGAA GAGGACGATT CGCCTGATAT GCAAGAGGAA
AGCCAGGCCT TGCTGCTGCG TGCCACCCGC ATGGATAACA GCGACACCCT GTGGGATCAC
TTGTTCGAAG ATGAAAGCCA GCAAACTATA TTACCCTCTG CACTGGCGCA CTATTTTGCA
CAACTGCGGG GCGACGCCTC CGGCGATGCA CTCAATCGTC AGCGCGAAGC CTTTATGGCC
CGCTGGATTG CATGGGCGAT GCAGCAAAAT AATGGCGACG TATTAGTCGT CTGCGGAGGC
TGGCACGCTC CGGCACTGGC AAAAATGTGG CGCGAATGCC CGCAAGAAAT TAACACGCCA
GAATTGCTCT TACTGGATGA TGCCGTTACA GGTTGCTATC TCACGCCCTA CAGTGAAAAG
CGCCTTGATG TGCTGGCAGG ATACCTTTCA GGAATGCCTG CCCCGGTCTG GCAAAACTGG
TGCTGGCGGT GGGGCTTGCA GCAGGCAGGT GAACAACTGC TGAAAACGGT TCTTACCCGT
TTGCGCCAGC ACCACTTGCC TGCTTCAACA GCGGATATGG CTGCCGCTCA TCTGCATGCG
ATGGCACTGG CACAGTTGCG CGGTCATACA CTACCGTTAC GCACTGACTG GCTGGATGCC
ATAGCAGGCT CGCTGATTAA AGAAGCCCTG AATGCGCCGT TGCCGTGGAG CTATCGCGGC
GTTATTCATC CCGATACCGA TCCGATTCTG CTAACGTTGA TAGACACATT AGCGGGTGAC
GGATTCGGTA AACTTGCCCC TTCTACGCCA CAACCGCCTC TGCCAAAAGA TGTCACCTGC
GAACTGGAAC GTACCGCAAT CTCTCTTCCG GCGGAGCTTA CCTTAAATCG CTTTAACCCC
AATGGACTAG CGCAAAGTCA GGTGTTACAT CGGCTGGCAA TACTGGAGAT CCCAGGGATT
GTACGCCAGC AGGGAAGCAC ACTGACACTT GCAGGTAACG GTGAAGAACG CTGGAAATTA
ACCCGCCCGC TTAGCCAACA TGCGGCATTA ATTGAGGCCG CCTGCTTTGG TGCCACACTC
CAGGAAGCCG CACGCCATAA ATTAGAAGCC GATATGCTGG ACGCGGGTGG AATCGGCAGT
ATCACCACAT GTCTTAGCCA GGCGGCGTTA GCGGGTCTGG CGTCCTTCAG TCAACAATTA
CTGGAGCAAC TTACATTATT AATCGCCCAG GAAAATCAGT TTGCCGAAAT GGGCCAGGCG
CTGGAAGTGC TATATGCCTT ATGGCGGCTG GATGAAATTA GCGGTATGCA AGGCGCGCAG
ATATTACAAA CGACGTTATG CGCGGCTATC GATCGCACGC TGTGGCTGTG TGAATCTAAC
GGCAGACCGG ATGAAAAGGA GTTTCACGCT CACCTGCATA GCTGGCAAGC GCTTTGCCAT
ATCCTGCGCG ATCTACATAG CGGCGTTAAT TTACCCGGCG TTTCTCTTTC TGCGGCGGTA
GCCTTACTGG AGCGACGCAG TCAGGCGATT CATGCCCCGG CGCTGGATCG CGGCGCGGCT
CTTGGCGCAC TAATGCGTCT GGAACATCCC AACGCCAGTG CCGAAGCGGC GCTGACGATG
CTGGCGCAGT TATCCCCGGC ACAATCCGGC GAGGCGCTGC ACGGTTTGCT GGCGCTGGCC
CGCCATCAAC TGGCCTGTCA GCCGGCATTT ATCGCCGGTT TCAGCAGTCA TTTAAATCAA
CTGAGTGATG CCGATTTTAT CAATGCCCTG CCCGATTTAC GCGCGGCGAT GGCCTGGCTA
CCACCACGAG AACGCGGGAC ACTGGCGCAT CAGGTGCTTG AGCATTACCA GCTCGCACAG
CTTCCCATTT CAGCGCTGCA AATGCCGTTG CATTGTCCAC CGCAAGCCAT TGCACATCAT
CAACAACTCG AACAGCAGGC ACTGGCATCG CTGCAACACT GGGGAGTTTT CCATGTCTGA
 
Protein sequence
MSEPLIVGIR HHSPACARLV KSLIESQRPR YVLIEGPADF NDRVDELLLA HQLPVAIYSY 
CQYQDGAAPG RGAWTPFAEF SPEWQALQAA RRIQAQTYFI DLPCWAQSEE EDDSPDMQEE
SQALLLRATR MDNSDTLWDH LFEDESQQTI LPSALAHYFA QLRGDASGDA LNRQREAFMA
RWIAWAMQQN NGDVLVVCGG WHAPALAKMW RECPQEINTP ELLLLDDAVT GCYLTPYSEK
RLDVLAGYLS GMPAPVWQNW CWRWGLQQAG EQLLKTVLTR LRQHHLPAST ADMAAAHLHA
MALAQLRGHT LPLRTDWLDA IAGSLIKEAL NAPLPWSYRG VIHPDTDPIL LTLIDTLAGD
GFGKLAPSTP QPPLPKDVTC ELERTAISLP AELTLNRFNP NGLAQSQVLH RLAILEIPGI
VRQQGSTLTL AGNGEERWKL TRPLSQHAAL IEAACFGATL QEAARHKLEA DMLDAGGIGS
ITTCLSQAAL AGLASFSQQL LEQLTLLIAQ ENQFAEMGQA LEVLYALWRL DEISGMQGAQ
ILQTTLCAAI DRTLWLCESN GRPDEKEFHA HLHSWQALCH ILRDLHSGVN LPGVSLSAAV
ALLERRSQAI HAPALDRGAA LGALMRLEHP NASAEAALTM LAQLSPAQSG EALHGLLALA
RHQLACQPAF IAGFSSHLNQ LSDADFINAL PDLRAAMAWL PPRERGTLAH QVLEHYQLAQ
LPISALQMPL HCPPQAIAHH QQLEQQALAS LQHWGVFHV