Gene EcSMS35_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0923 
Symbol 
ID6142854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp931619 
End bp932755 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID641615811 
Productvon Willebrand factor type A domain-containing protein 
Protein accessionYP_001743003 
Protein GI170683571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC TGAACGATCT TCTGACCACC CGTGAGCTAC AACGCTGGCG ATTAATTCTT 
GGCGAAGCGG CAGAAACGAC CCTTTGTGGG CTGGATGACA ATGCCCGGCA GATAGACCAC
GCGCTGGAGT GGCTGTACGG GCGCGATCCT GAACGGCTCC AGCGTGGTGA ACGCTCTGGT
GGATTAGGTG GCTCAAATCT CACCCCCCCT GAGTGGATCA ACAGTATTCA CACGCTGTTT
CCGCAACAGG TGATTGAGCG ACTGGAAAGC GATGCCGTAC TGCGCTACGG CATTGAAGAT
GTGGTGACGA ATCTCGACGT GCTGGAACGT ATGCAGCCTT CGGAAAGCCT GCTACGCGCC
GTTTTGCACA CCAAACATCT GATGAATCCC GAAGTGCTGG CTGCCGCCCG CCGGATAGTG
CACCAGGTTG TTGAAGAAAT TATGGCTCGA CTGGCAAAGG AAGTTCGTCA GGCTTTTTCT
GGAGTACGCG ATCGCCGTCG CCGCTCATTT ATTTCACTGG TGCGAAACTT TGATTTCAAA
AGTACTCTGC GCGCCAACCT GCAACACTGG CACCCGCAAC ACGGCAAGTT GTATATCGAA
TCCCCCCGCT TTAACAGCCG CATTAAACGC CAAAGCGAAC AATGGCAACT GGTCTTACTG
GTTGATCAAA GCGGATCGAT GGTTGACTCG GTGATCCACT CTGCGGTGAT GGCGGCCTGT
TTATGGCAGT TACCCGGCAT TCGTACCCAT CTGGTGGCGT TTGACACCAG CGTCGTTGAT
CTCACGGCAG ACGTTGCTGA TCCGGTAGAG TTATTAATGA AAGTACAACT GGGCGGCGGG
ACCAATATCG CCAGTGCCGT GGAGTATGGT CGGCAACTTA TTGAACAACC AGCAAAAAGC
GTCATTATCC TCGTGAGCGA TTTCTATGAA GGGGGTTCAT CATCATTGCT GACGCATCAG
GTGAAAAAGT GTGTCCAGAG CGGCGTCAAA GTGCTGGGAC TGGCGGCGCT CGATAGCACC
GCAACACCTT GCTATGACCG CGATATGGCC CAGGCGCTGG TTAATGTCGG CGCACAAATA
GCTGCCATGA CACCGGGCGA ACTGGCGGCC TGGCTTGCGG AGAATCTTCA GTCATGA
 
Protein sequence
MSELNDLLTT RELQRWRLIL GEAAETTLCG LDDNARQIDH ALEWLYGRDP ERLQRGERSG 
GLGGSNLTPP EWINSIHTLF PQQVIERLES DAVLRYGIED VVTNLDVLER MQPSESLLRA
VLHTKHLMNP EVLAAARRIV HQVVEEIMAR LAKEVRQAFS GVRDRRRRSF ISLVRNFDFK
STLRANLQHW HPQHGKLYIE SPRFNSRIKR QSEQWQLVLL VDQSGSMVDS VIHSAVMAAC
LWQLPGIRTH LVAFDTSVVD LTADVADPVE LLMKVQLGGG TNIASAVEYG RQLIEQPAKS
VIILVSDFYE GGSSSLLTHQ VKKCVQSGVK VLGLAALDST ATPCYDRDMA QALVNVGAQI
AAMTPGELAA WLAENLQS