Gene EcSMS35_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0920 
Symbol 
ID6145686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp928525 
End bp928995 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID641615808 
Producthypothetical protein 
Protein accessionYP_001743000 
Protein GI170682350 
COG category[S] Function unknown 
COG ID[COG4807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGTA ACGATATTCT GCGCAGCGTG CGCTACATTT TGAAAGCCAA TAATAATGAC 
CTGGTGCGTA TTCTGGCGCT GGGTAATGTC GAAGCCACCG CGGAACAGAT CGCCGTCTGG
CTACGTAAAG AAGACGAAGA GGGTTTTCAG AGTTGTCCGG ACATTGTTTT GTCGTCATTC
CTCAATGGCC TGATTTATGA AAAACGCGGC AAGGATGAGT CTGCTCCGGC ACTGGAGCCG
GAACGTCGCA TTAATAACAA CATCGTGCTG AAAAAATTAC GCATCGCGTT TTCGCTTAAA
ACCGATGACA TTCTGGCAAT CCTCACCGAA CAGCAGTTCC GCGTTTCGAT GCCGGAAATT
ACGGCGATGA TGCGTGCACC GGATCATAAA AACTTCCGCG AATGCGGCGA TCAATTTTTA
CGTTATTTTC TGCGTGGACT GGCAGCGCGC CAGCATGTGA AGAAAAGCTA A
 
Protein sequence
MLSNDILRSV RYILKANNND LVRILALGNV EATAEQIAVW LRKEDEEGFQ SCPDIVLSSF 
LNGLIYEKRG KDESAPALEP ERRINNNIVL KKLRIAFSLK TDDILAILTE QQFRVSMPEI
TAMMRAPDHK NFRECGDQFL RYFLRGLAAR QHVKKS