Gene EcSMS35_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0907 
Symbol 
ID6142671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp914300 
End bp914878 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content55% 
IMG OID641615796 
Producthypothetical protein 
Protein accessionYP_001742988 
Protein GI170682767 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.339562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.188855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA ATACACTCAT CTCACAATAT GGTTATGCCG CGCTGGTGAT CGGTAGCCTG 
GCGGAAGGTG AAACCGTGAC TTTGCTGGGA GGCGTTGCGG CACATCAGGG GCTATTAAAG
TTCCCGCTGG TGGTACTTTC TGTGGCGCTT GGCGGCATGA TTGGCGACCA GGTGCTTTAT
CTGTGCGGGC GGCGCTTTGG CGGCAAGCTG TTACGCCGTT TCTCGAAACA TCAGGATAAA
ATTGAGCGGG CGCAGAAACT TATCCAACGC CATCCGTATC TGTTTGTCAT TGGTACGCGT
TTTATGTATG GCTTTCGGGT GATTGGCCCG ACGCTGATTG GTGCCAGCCA GCTGCCGCCG
AAAATCTTTC TGCCGCTGAA TATTCTCGGC GCATTTGCCT GGGCGCTGAT TTTTACCACT
ATCGGTTACG CTGGTGGGCA GGTGATTGCG CCGTGGTTGC ACAATCTCGA CCAGCATTTG
AAGCACTGGG TCTGGTTGAT TCTGGTCGTG GTTCTGGTGG TAGGCGTGCG CTGGTGGCTG
AAACGGCGCG GGAAGAAAAA GCCGGATCAT CAGGCGTAA
 
Protein sequence
MDLNTLISQY GYAALVIGSL AEGETVTLLG GVAAHQGLLK FPLVVLSVAL GGMIGDQVLY 
LCGRRFGGKL LRRFSKHQDK IERAQKLIQR HPYLFVIGTR FMYGFRVIGP TLIGASQLPP
KIFLPLNILG AFAWALIFTT IGYAGGQVIA PWLHNLDQHL KHWVWLILVV VLVVGVRWWL
KRRGKKKPDH QA