Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0889 |
Symbol | artM |
ID | 6145676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 893263 |
End bp | 893931 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615777 |
Product | arginine transporter permease subunit ArtM |
Protein accession | YP_001742969 |
Protein GI | 170679691 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.13715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGT ATTTACCCGA ACTGATGAAA GGGCTGCACA CCAGCCTGAC GCTAACCGTT GCCTCGCTGA TTGTGGCACT GATTCTGGCA TTGATTTTTA CCATCATCCT GACGCTGAAA ACGCCGGTGC TAGTGTGGCT GGTACGGGGC TATATCACGC TGTTTACCGG TACGCCGCTG CTGGTGCAGA TCTTCCTGAT TTATTACGGA CCGGGCCAGT TCCCGACGTT GCAGGAGTAT CCGGCACTGT GGCATTTGTT GTCAGAACCG TGGTTATGTG CGCTGATTGC GTTGTCGCTG AACAGTGCGG CGTACACCAC GCAGCTGTTT TACGGTGCGA TTCGCGCGAT CCCGGAAGGT CAATGGCAGT CCTGTAGCGC CCTGGGAATG AGCAAAAAAG ATACGCTGGC GATCCTGCTG CCGTACGCGT TTAAACGCTC GCTCTCTTCT TATTCCAACG AAGTGGTGCT GGTGTTCAAA AGTACTTCTC TGGCTTACAC CATTACGCTG ATGGAAGTGA TGGGATACAG CCAGTTGTTG TACGGACGCA CCTACGATGT CATGGTGTTC GGTGCGGCAG GGATTATTTA CCTGATTGTT AACGGTCTGC TGACGCTGAT GATGCGTCTG ATCGAGCGTA AAGCACTGGC GTTTGAGCGA AGGAATTAA
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Protein sequence | MFEYLPELMK GLHTSLTLTV ASLIVALILA LIFTIILTLK TPVLVWLVRG YITLFTGTPL LVQIFLIYYG PGQFPTLQEY PALWHLLSEP WLCALIALSL NSAAYTTQLF YGAIRAIPEG QWQSCSALGM SKKDTLAILL PYAFKRSLSS YSNEVVLVFK STSLAYTITL MEVMGYSQLL YGRTYDVMVF GAAGIIYLIV NGLLTLMMRL IERKALAFER RN
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