| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0888 |
|---|
| Symbol | artJ |
|---|
| ID | 6145655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 892306 |
|---|
| End bp | 893037 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641615776 |
|---|
| Product | arginine ABC transporter, periplasmic arginine-binding protein ArtJ |
|---|
| Protein accession | YP_001742968 |
|---|
| Protein GI | 170681491 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.214233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TAGTTCTTGC CGCTTTACTT TCATCCTGTG CATTCGGCGC TTCTGCCGCA
GAGAAAATCA ATTTTGGCGT TTCAGCCACC TATCCACCCT TTGAATCTAT AGGTGCTAAT
AATGAGATTG TCGGCTTTGA TATCGATCTG GCAAAAGCCT TGTGCAAACA AATGCAGGCA
GAATGTACTT TTACGAATCA CGCGTTCGAC AGCCTGATCC CGTCACTGAA ATTCAGAAAA
TATGACGCCG TAATCTCCGG TATGGATATC ACCCCGGAGC GTAGCAAACA GGTATCGTTT
ACCACGCCCT ACTATGAAAA CTCAGCCGTC GTGATTGCCA AAAAAAATAC CTACAAAACG
TTTGCCGATC TGAAAGGCAA ACGTATTGGG ATGGAAAACG GCACCACGCA CCAGAAATAT
ATTCAGGATC AGCACCCGGA AGTGAAAACT GTCTCCTATG ACAGTTATCA GAATGCCTTT
ATCGATCTGA AAAATGGCCG TATTGATGGC GTATTTGGTG ACACCGCAGT GGTAAACGAA
TGGCTGAAAA CCAATCCGCA ACTGGGCGTT GCGACTGAAA AAGTGACCGA TCCGCAATAC
TTCGGCACCG GCCTGGGTAT CGCTGTACGT CCGGATAACA AAGCTCTGCT GGAAAAACTG
AATAATGCGC TGGCAGCAAT TAAAGCTGAC GGTACATATC AGAAAATCAA TGACCAGTGG
TTCCCACAGT AA
|
|---|
| Protein sequence | MKKLVLAALL SSCAFGASAA EKINFGVSAT YPPFESIGAN NEIVGFDIDL AKALCKQMQA
ECTFTNHAFD SLIPSLKFRK YDAVISGMDI TPERSKQVSF TTPYYENSAV VIAKKNTYKT
FADLKGKRIG MENGTTHQKY IQDQHPEVKT VSYDSYQNAF IDLKNGRIDG VFGDTAVVNE
WLKTNPQLGV ATEKVTDPQY FGTGLGIAVR PDNKALLEKL NNALAAIKAD GTYQKINDQW
FPQ
|
|---|
| |