| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0884 |
|---|
| Symbol | potH |
|---|
| ID | 6146223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 888766 |
|---|
| End bp | 889719 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641615772 |
|---|
| Product | putrescine transporter subunit: membrane component of ABC superfamily |
|---|
| Protein accession | YP_001742964 |
|---|
| Protein GI | 170684139 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.994731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAC TTGAACCTGC TGCCCAGTCG AAACCGCCGG GCGGATTTAA GCTGTGGTTG
TCGCAGCTGC AAATGAAGCA TGGGCGCAAA CTGGTGATTG CGCTGCCGTA TATCTGGCTA
ATCCTGCTGT TTCTGCTGCC ATTTCTGATT GTCTTTAAAA TAAGCCTGGC GGAGATGGCG
CGCGCTATTC CACCTTATAC CGAACTGATG GAGTGGGCTG ACGGGCAACT TTCCATCACT
CTTAATCTCG GTAATTTTCT GCAACTGACT GACGATCCGC TCTATTTCGA TGCTTATCTC
CAGTCGCTAC AGGTGGCGGC GATTTCGACT ATTTGCTGTT TACTGATCGG CTATCCGCTG
GCGTGGGCGG TGGCGCACAG TAAGCCTTCG ACCCGTAATA TCTTATTACT ACTGGTGATC
CTGCCGTCGT GGACCTCGTT TCTGATTCGC GTTTATGCCT GGATGGGAAT ATTAAAAAAT
AACGGCGTAC TGAATAATTT TCTGCTGTGG CTGGGGGTTA TCGATCAACC GCTGACCATT
CTACATACCA ATCTGGCCGT TTATATCGGC ATTGTTTACG CCTACGTGCC GTTTATGGTA
CTGCCGATTT ATACCGCGTT GATTCGAATT GATTATTCGC TGGTGGAAGC AGCACTGGAT
CTCGGTGCAC GACCACTGAA AACGTTCTTT ACTGTGATCG TGCCGCTGAC TAAAGGTGGG
ATTATTGCCG GATCGATGCT GGTGTTTATC CCGGCTGTGG GCGAGTTTGT GATCCCTGAA
CTGCTCGGTG GCCCGGACAG CATCATGATC GGGCGCGTGC TGTGGCAGGA GTTCTTTAAC
AACCGCGACT GGCCGGTGGC CTCAGCGGTA GCGATCATCA TGTTGCTGCT GCTAATTGTG
CCGATAATGT GGTTCCACAA GCATCAGCAA AAAAGCGTGG GAGAACACGG ATGA
|
|---|
| Protein sequence | MSTLEPAAQS KPPGGFKLWL SQLQMKHGRK LVIALPYIWL ILLFLLPFLI VFKISLAEMA
RAIPPYTELM EWADGQLSIT LNLGNFLQLT DDPLYFDAYL QSLQVAAIST ICCLLIGYPL
AWAVAHSKPS TRNILLLLVI LPSWTSFLIR VYAWMGILKN NGVLNNFLLW LGVIDQPLTI
LHTNLAVYIG IVYAYVPFMV LPIYTALIRI DYSLVEAALD LGARPLKTFF TVIVPLTKGG
IIAGSMLVFI PAVGEFVIPE LLGGPDSIMI GRVLWQEFFN NRDWPVASAV AIIMLLLLIV
PIMWFHKHQQ KSVGEHG
|
|---|
| |