| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0882 |
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| Symbol | potF |
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| ID | 6146448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 886416 |
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| End bp | 887528 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615770 |
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| Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
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| Protein accession | YP_001742962 |
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| Protein GI | 170682561 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.360261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT TAAATAAAAA ATGGCTATCG GGTCTGGTTG CGGGTGCTCT GATGGCCGTC
TCTGTCAGCA CGCTCGCGGC TGAACAAAAA ACACTCCACA TTTATAACTG GTCTGATTAT
ATCGCCCCGG ACACGGTGGC CAATTTTGAA AAAGAAACCG GTATTAAAGT CGTCTACGAT
GTTTTCGACT CTAACGAAGT ACTGGAAGGC AAATTAATGG CGGGTAGCAC CGGCTTTGAC
CTGGTGGTGC CGTCAGCAAG CTTTCTTGAA CGCCAGTTGA CTGCGGGAGT TTTCCAGCCG
CTGGATAAAA GCAAATTGCC GGAGTGGAAG AATCTCGACC CGGAACTGCT GAAGTTGGTT
GCCAAACACG ACCCGGATAA TAAATTTGCT ATGCCCTATA TGTGGGCGAC AACCGGGATT
GGCTATAACG TCGATAAAGT CAAAGCGGTG CTGGGCGAAA ACGCGCCCGT CGATAGCTGG
GACTTGATCC TCAAACCTGA AAATCTGGAA AAACTGAAAA GCTGCGGCGT CTCTTTCCTT
GATGCACCGG AAGAAGTGTT TGCTACCGTG CTGAATTATC TCGGTAAAGA TCCCAACAGC
ACTAAAGCAG ATGATTACAC CGGACCGGCA ACCGATCTGC TGTTAAAGCT GCGCCCGAAC
ATTCGTTATT TCCATTCATC TCAATACATT AACGACCTGG CAAACGGCGA TATCTGCGTC
GCTATTGGCT GGGCGGGCGA TGTCTGGCAG GCGTCAAACC GCGCGAAGGA AGCGAAGAAT
GGCGTTAATG TCTCGTTCTC GATTCCGAAA GAAGGGGCGA TGGCGTTCTT TGATGTCTTC
GCCATGCCTG CGGATGCCAA AAATAAAGAC GAAGCCTATC AGTTCCTGAA TTACCTGCTG
CGCCCGGATG TGGTGGCGCA TATTTCCGAC CATGTGTTCT ATGCCAACGC GAACAAAGAA
GCTACGCCGC TGGTAAGCGC GGAAGTGCGT GATAATCCAG GGATTTATCC TCCGGCGGAC
GTTCGTGCGA AGTTGTTCAC TCTGAAAGTG CAGGATCCAA AAATAGACCG TGTGCGCACC
CGCGCGTGGA CCAAAGTGAA GAGCGGAAAA TAA
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| Protein sequence | MTALNKKWLS GLVAGALMAV SVSTLAAEQK TLHIYNWSDY IAPDTVANFE KETGIKVVYD
VFDSNEVLEG KLMAGSTGFD LVVPSASFLE RQLTAGVFQP LDKSKLPEWK NLDPELLKLV
AKHDPDNKFA MPYMWATTGI GYNVDKVKAV LGENAPVDSW DLILKPENLE KLKSCGVSFL
DAPEEVFATV LNYLGKDPNS TKADDYTGPA TDLLLKLRPN IRYFHSSQYI NDLANGDICV
AIGWAGDVWQ ASNRAKEAKN GVNVSFSIPK EGAMAFFDVF AMPADAKNKD EAYQFLNYLL
RPDVVAHISD HVFYANANKE ATPLVSAEVR DNPGIYPPAD VRAKLFTLKV QDPKIDRVRT
RAWTKVKSGK
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