| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0869 |
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| Symbol | mdfA |
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| ID | 6146383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 876305 |
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| End bp | 877537 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615757 |
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| Product | multidrug translocase MdfA |
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| Protein accession | YP_001742949 |
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| Protein GI | 170681504 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.468939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA AATTAGCTTC CGGTGCCAGG CTTGGACGTC AGGCGTTACT TTTCCCTCTC
TGTCTGGTGC TTTACGAATT TTCAACCTAT ATCGGCAACG ATATGATTCA ACCCGGTATG
TTGGCGGTGG TGGAACAATA TCAGGCGGGC ATTGATTGGG TTCCTACTTC GATGACCGCG
TATCTGGCGG GCGGGATGTT TTTACAATGG CTCCTGGGGC CGCTGTCGGA TCGTATTGGC
CGCCGTCCGG TGATGCTGGC GGGAGTGGTG TGGTTTATCG TCACCTGTCT GGCAATATTA
CTGGCGCAAA ACATTGAACA ATTCACCCTG TTGCGCTTCT TGCAGGGCAT AAGCCTCTGT
TTCATTGGCG CTGTGGGATA CGCCGCAATT CAGGAATCCT TCGAAGAGGC GGTTTGTATC
AAGATCACCG CGCTGATGGC GAACGTGGCG CTGATTGCTC CGCTACTTGG TCCGCTGGTG
GGCGCGGCGT GGATCCATGT GCTGCCCTGG GAGGGGATGT TTGTCTTGTT TGCCGCATTG
GCAGCGATCT CCTTTTTCGG TCTACAACGA GCCATGCCTG AAACCGCCAC GCGTATAGGC
GAGAAACTGT CGCTGAAAGA ACTCGGTCGT GACTATAAGC TGGTGCTGAA GAACGGTCGC
TTTGTGGCGG GGGCGCTGGC GCTGGGATTC GTTAGCCTGC CATTGCTGGC GTGGATCGCC
CAGTCGCCGA TTATCATCAT TACCGGCGAG CAGTTGAGCA GCTATGAATA TGGTTTGCTG
CAAGTGCCTA TTTTCGGGGC GTTAATTGCG GGTAACTTGC TGTTAGCGCG TCTGACCTCG
CGCCGCACCG TACGTTCGCT GATTATTATG GGCGGCTGGC CGATTATGAT TGGTCTGTTG
GTCGCTGCTG CGGCAACGGT TATCTCATCG CATGCGTATT TATGGATGAC CGCCGGGTTA
AGTCTTTATG CTTTCGGTAT TGGTCTGGCG AATGCGGGAC TGGTGCGATT AACCCTGTTT
GCCAGCGATA TGAGTAAAGG TACGGTTTCT GCGGCGATGG GGATGCTGCA AATGCTGATC
TTTACCGTCG GTATTGAAAT CAGCAAACAT GCCTGGCTGA ACGGGGGCAA CGGACTGTTT
AATCTCTTCA ACCTTGTCAA CGGCATTTTG TGGCTGTTGC TGATGGTTAT CTTTTTAAAA
GATAAACAGA TGGGAAATTC GCACGAAGGG TAA
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| Protein sequence | MQNKLASGAR LGRQALLFPL CLVLYEFSTY IGNDMIQPGM LAVVEQYQAG IDWVPTSMTA
YLAGGMFLQW LLGPLSDRIG RRPVMLAGVV WFIVTCLAIL LAQNIEQFTL LRFLQGISLC
FIGAVGYAAI QESFEEAVCI KITALMANVA LIAPLLGPLV GAAWIHVLPW EGMFVLFAAL
AAISFFGLQR AMPETATRIG EKLSLKELGR DYKLVLKNGR FVAGALALGF VSLPLLAWIA
QSPIIIITGE QLSSYEYGLL QVPIFGALIA GNLLLARLTS RRTVRSLIIM GGWPIMIGLL
VAAAATVISS HAYLWMTAGL SLYAFGIGLA NAGLVRLTLF ASDMSKGTVS AAMGMLQMLI
FTVGIEISKH AWLNGGNGLF NLFNLVNGIL WLLLMVIFLK DKQMGNSHEG
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