| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0867 |
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| Symbol | deoR |
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| ID | 6145988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 874608 |
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| End bp | 875366 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641615755 |
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| Product | DNA-binding transcriptional repressor DeoR |
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| Protein accession | YP_001742947 |
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| Protein GI | 170680830 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACAC GTCGCGAAGA GCGTATCGGG CAGCTGCTGC AAGAATTAAA ACGCAGCGAT
AAGTTACATC TTAAAGACGC CGCCGCCCTG CTTGGGGTTT CGGAGATGAC GATTCGTCGC
GATCTGAACA ACCACAGTGC GCCCGTCGTT TTGCTCGGCG GCTATATTGT TCTGGAACCG
CGCAGTGCCA GCCATTACCT GTTAAGCGAT CAAAAATCCC GCCTGGTGGA AGAAAAACGC
CGGGCGGCAA AACTGGCTGC GACGATGGTA GAACCCGATC AGACCCTCTT TTTTGACTGT
GGCACCACCA CACCGTGGAT TATTGAAGCG ATTGATAATG AAATCCCTTT TACCGCCGTT
TGTTATTCGC TAAATACCTT TCTGGCGCTG AAAGAGAAAC CTCATTGCCG CGCGTTTCTG
TGTGGTGGTG AATTTCACGC CAGCAACGCC ATTTTCAAAC CCATCGATTT TCAGCAAACG
CTGAATAATT TTTGCCCGGA TATCGCTTTT TATTCTGCGG CGGGCGTGCA TGTCAGTAAA
GGCGCTACCT GTTTTAATCT TGAAGAGTTG CCGGTAAAAC ACTGGGCCAT GTCGATGGCG
CAAAAGCATG TGCTGGTTGT CGACCACAGT AAATTTGGCA AGGTGCGTCC GGCGCGCATG
GGTGACCTGA AACGCTTTGA TATTGTTGTG AGCGATTGTT GCCCGGAAGA TGAGTATGTG
AAGTACGCGC AGACGCAGCG TATTAAGTTG ATATATTAA
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| Protein sequence | METRREERIG QLLQELKRSD KLHLKDAAAL LGVSEMTIRR DLNNHSAPVV LLGGYIVLEP
RSASHYLLSD QKSRLVEEKR RAAKLAATMV EPDQTLFFDC GTTTPWIIEA IDNEIPFTAV
CYSLNTFLAL KEKPHCRAFL CGGEFHASNA IFKPIDFQQT LNNFCPDIAF YSAAGVHVSK
GATCFNLEEL PVKHWAMSMA QKHVLVVDHS KFGKVRPARM GDLKRFDIVV SDCCPEDEYV
KYAQTQRIKL IY
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