| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0862 |
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| Symbol | rimO |
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| ID | 6143268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 869342 |
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| End bp | 870667 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615750 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001742942 |
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| Protein GI | 170679937 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.746353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAG TAACTCCCCA GCCGAAAATC GGCTTTGTTT CCCTTGGCTG TCCGAAAAAC
CTTGTCGATT CAGAGCGTAT TCTCACCGAA CTACGCACTG AAGGTTATGA CGTGGTACCG
AGCTATGACG ATGCGGACAT GGTGATCGTC AACACCTGCG GCTTTATTGA CAGCGCGGTA
CAAGAATCAC TGGAAGCCAT TGGTGAAGCG TTGAATGAAA ACGGCAAGGT AATTGTGACC
GGTTGTCTGG GGGCAAAAGA AGATCAGATC CGCGAAGTCC ACCCGAAAGT GCTGGAAATC
ACCGGGCCTC ATAGCTATGA GCAGGTTCTG GAGCACGTTC ATCACTACGT GCCAAAACCG
AAACACAACC CATTCCTGAG CCTGGTGCCA GAACAAGGTG TGAAACTGAC ACCGCGTCAT
TATGCCTATC TGAAAATTTC TGAAGGCTGT AATCACCGCT GCACCTTCTG CATTATTCCG
TCTATGCGCG GCGACCTGGT GAGCCGTCCG ATTGGCGAAG TGTTAAGTGA AGCGAAACGT
CTGGTTGATG CGGGCGTTAA AGAGATTCTG GTGATCTCGC AGGATACTTC CGCGTATGGC
GTCGATGTTA AACATCGTAC TGGCTTCCAC AACGGCGAGC CCGTAAAAAC CAGCATGGTC
AGCCTGTGCG AACAGTTATC GAAACTGGGG ATCTGGACAC GTCTGCACTA CGTTTACCCT
TATCCGCATG TGGACGACGT CATCCCACTG ATGGCAGAAG GCAAAATCCT GCCGTATCTG
GACATTCCGT TGCAGCACGC CAGCCCGCGC ATTCTCAAAC TGATGAAGCG TCCGGGTTCT
GTAGATCGCC AACTGGCGCG CATCAAACAG TGGCGCGAAA TCTGCCCGGA ACTGACCCTA
CGCTCAACCT TTATTGTCGG CTTCCCTGGC GAGACGGAAG AAGATTTCCA GATGCTACTC
GACTTCCTGA AAGAAGCACG TCTGGATCGC GTTGGCTGCT TTAAATACAG CCCGGTTGAA
GGTGCAGACG CCAATGCCCT GCCTGACCAG GTTCCGGAAG AAGTGAAAGA AGAACGCTGG
AACCGTTTCA TGCAGTTGCA GCAGCAGATT TCCGCCGAGC GCCTGCAAGA GAAAGTGGGC
CGTGAAATTC TGGTGATTAT CGACGAAGTG GACGAAGAAG GTGCGATTGG TCGCAGCATG
GCAGATGCAC CGGAAATCGA CGGCGCGGTT TATCTCAATG GTGAAACCAA CGTTAAGCCG
GGTGATATCC TGCGTGTGAA AGTCGAGCAC GCCGATGAGT ACGATTTGTG GGGTAGCCGG
GTTTAA
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| Protein sequence | MSKVTPQPKI GFVSLGCPKN LVDSERILTE LRTEGYDVVP SYDDADMVIV NTCGFIDSAV
QESLEAIGEA LNENGKVIVT GCLGAKEDQI REVHPKVLEI TGPHSYEQVL EHVHHYVPKP
KHNPFLSLVP EQGVKLTPRH YAYLKISEGC NHRCTFCIIP SMRGDLVSRP IGEVLSEAKR
LVDAGVKEIL VISQDTSAYG VDVKHRTGFH NGEPVKTSMV SLCEQLSKLG IWTRLHYVYP
YPHVDDVIPL MAEGKILPYL DIPLQHASPR ILKLMKRPGS VDRQLARIKQ WREICPELTL
RSTFIVGFPG ETEEDFQMLL DFLKEARLDR VGCFKYSPVE GADANALPDQ VPEEVKEERW
NRFMQLQQQI SAERLQEKVG REILVIIDEV DEEGAIGRSM ADAPEIDGAV YLNGETNVKP
GDILRVKVEH ADEYDLWGSR V
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