Gene EcSMS35_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0860 
Symbol 
ID6146831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp868411 
End bp868740 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content45% 
IMG OID641615748 
ProductDNA-binding protein 
Protein accessionYP_001742940 
Protein GI170683292 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AATTACAAAT GATGCTGGAA GATGCAAAGG AACTGAATGC ACTGGGCCTG 
ATGTCTGATA GTGAAGTTGA TGCCATTGCC GTCATGGTCA AAGCTCGTGA AGTCAGCGCC
CGTATAGCCA AAGTCAAATC AATGACGGGT GAAGAGATCA AAGCCATCCG CACCCGATAC
GGCATGTCAC AATCCGTGCT GGCACATACA ATGGGAATGT CAAAAGAAAG TGTCTCGAAA
TGGGAACGTA ATGAAATAAA ACCGAGCGGC CCGGCATTAC GTATTTTGAA TACATTGGCA
ATAAAAGGGC CGGAAGTTTT TGCAAAGTAA
 
Protein sequence
MSDKLQMMLE DAKELNALGL MSDSEVDAIA VMVKAREVSA RIAKVKSMTG EEIKAIRTRY 
GMSQSVLAHT MGMSKESVSK WERNEIKPSG PALRILNTLA IKGPEVFAK