Gene EcSMS35_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0853 
Symbol 
ID6146091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp858247 
End bp859212 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID641615741 
ProductL-asparaginase 
Protein accessionYP_001742933 
Protein GI170681222 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAG CAGTCATTGC AATTCATGGC GGCGCAGGTG CAATTAGCCG CGCGCAGATG 
AGTCTGCAAC AGGAATTACG CTACATCGAG GCGCTGTCTG CCATTGTTGA AACCGGGCAG
AAAATGCTGG AAGCGGGCGA AAGTGCGCTG GATGTGGTGA CGGAAGCGGT GCGTCTGCTG
GAAGAGTGTC CACTGTTTAA CGCCGGAATT GGCGCTGTCT TTACGCGTGA TGAAACCCAT
GAACTGGACG CCTGTGTGAT GGATGGTAAC ACCCTGAAAG CCGGTGCGGT GGCGGGCGTT
AGTCATCTGC GTAATCCGGT TCTTGCCGCC CGGCTGGTGA TGGAGCAAAG CCCGCATGTG
ATGATGATTG GCGAAGGGGC AGAAAATTTT GCGTTTGCTC ATGGCATGGA GCGCGTCTCA
CCGGAGATTT TCTCCACGCC TTTGCGTTAT GAACAACTAC TGGCAGCGCG CGAGGAAGGG
GCAACAGTCC TCGACCATAG CGGTGCGCCA CTGGATGAAA AACAGAAAAT GGGCACCGTG
GGGGCCGTGG CGTTGGATTT AGACGGCAAT CTGGCGGCAG CCACGTCCAC GGGCGGAATG
ACCAATAAAT TACCCGGACG AGTTGGCGAT AGTCCCTTAG TGGGTGCCGG ATGCTACGCC
AATAACGCCA GTGTGGCGGT TTCTTGTACC GGCACGGGCG AAGTCTTCAT CCGCGCGCTG
GCGGCATATG ACATCGCCGC GTTAATGGAT TACGGCGGAT TAAGTCTCGC GGAAGCCTGC
GAGCGGGTAG TAATGGAAAA ACTCCCTGCG CTTGGCGGTA GCGGTGGCTT AATCGCTATC
GACCATGAAG GTAACGTCGC GCTACCGTTT AACACCGAAG GAATGTATCG CGCCTGGGGC
TACGCAGGCG ATACGCCAAC CACCGGTATC TACCGTGAAA AAGGGGACAC CGTTGCCACA
CAGTGA
 
Protein sequence
MGKAVIAIHG GAGAISRAQM SLQQELRYIE ALSAIVETGQ KMLEAGESAL DVVTEAVRLL 
EECPLFNAGI GAVFTRDETH ELDACVMDGN TLKAGAVAGV SHLRNPVLAA RLVMEQSPHV
MMIGEGAENF AFAHGMERVS PEIFSTPLRY EQLLAAREEG ATVLDHSGAP LDEKQKMGTV
GAVALDLDGN LAAATSTGGM TNKLPGRVGD SPLVGAGCYA NNASVAVSCT GTGEVFIRAL
AAYDIAALMD YGGLSLAEAC ERVVMEKLPA LGGSGGLIAI DHEGNVALPF NTEGMYRAWG
YAGDTPTTGI YREKGDTVAT Q