| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0834 |
|---|
| Symbol | glnP |
|---|
| ID | 6146242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 838138 |
|---|
| End bp | 838797 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641615722 |
|---|
| Product | glutamine ABC transporter permease protein |
|---|
| Protein accession | YP_001742914 |
|---|
| Protein GI | 170683637 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000546906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTG ACTGGAGTGC CATCTGGCCA GCCATTCCGC TTCTGATTGA AGGTGCCAAA
ATGACCCTGT GGATCTCGGT CCTCGGTCTG GCTGGCGGCC TGGTGATCGG ATTGCTGGCA
GGTTTTGCAC GCACCTTCGG TGGTTGGATA GCCAACCACG TCGCGCTGGT CTTTATTGAA
GTGATCCGCG GCACACCTAT CGTCGTCCAG GTGATGTTTA TCTATTTCGC CCTGCCGATG
GCGTTTAACG ACTTACGCAT CGACCCGTTT ACTGCGGCGG TGGTCACCAT CATGATCAAC
TCTGGCGCGT ACATTGCGGA AATCACGCGT GGTGCGGTGC TGTCTATTCA CAAAGGTTTT
CGTGAAGCAG GACTGGCGCT CGGTCTTTCA CGTTGGGAAA CCATTCGCTA CGTCATTTTA
CCGCTGGCAC TGCGTCGTAT GCTGCCGCCG CTGGGTAACC AGTGGATCAT CAGCATTAAA
GACACCTCGC TGTTTATTGT TATCGGTGTG GCGGAACTGA CCCGTCAGGG GCAAGAAATT
ATTGCCGGTA ACTTCCGCGC CCTTGAGATC TGGAGCGCCG TGGCGGTGTT CTATCTGATT
ATTACCCTGG TGCTGAGCTT TATTCTGCGT CGTCTGGAAA GAAGGATGAA AATCCTGTGA
|
|---|
| Protein sequence | MQFDWSAIWP AIPLLIEGAK MTLWISVLGL AGGLVIGLLA GFARTFGGWI ANHVALVFIE
VIRGTPIVVQ VMFIYFALPM AFNDLRIDPF TAAVVTIMIN SGAYIAEITR GAVLSIHKGF
REAGLALGLS RWETIRYVIL PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI
IAGNFRALEI WSAVAVFYLI ITLVLSFILR RLERRMKIL
|
|---|
| |