| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0831 |
|---|
| Symbol | |
|---|
| ID | 6143031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 835077 |
|---|
| End bp | 837302 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641615720 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001742912 |
|---|
| Protein GI | 170680728 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0229209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGGA TCCTGTTCAT CCTCTTCTGC CTGCTGGGCG CACCTGCCCA CGCGGTATCC
ATACCCGGCG TTACAACCAC AACGACAACG GACTCAACGA CTGAACCGGC CCCGGAACCG
GATATCGAAC AAAAAAAAGC GGCCTATGGC GCACTGGCGG ATGTGCTGGA TAATGACACC
TCGCGTAAAG AGTTGATCGA CCAGTTGCGC ACCGTCGCCG CGACGCCCCC GGCAGAACCC
GTACCGAAGA TCGTGCCGCC GACGCTGGTT GAAGAGCAAA CCGTGCTGCA AAAGGTCACC
GAAGTCAGCC GCCATTATGG TGAAGCCCTT TCCGCCCGCT TCGGGCAACT TTATCGCAAT
ATCACCGGCT CCCCGCATAA GCCGTTTAAT CCACAAACCT TCAGCAATGC GTTGACCCAT
TTTTCAATGT TAGCGGTATT AGTGTTTGTT TTTTACTGGC TGATTCGCCT GTGCGCACTT
CCGCTGTATC GCAAAATGGG CCAGTGGGCG CGGCAAAAAA ATCGTGAGCG CAGTAACTGG
TTGCAGCTTC CGGCGATGAT TATCGGGGCG TTTATTATCG ACCTGCTGTT ACTGGCACTG
ACATTGTTTG TCGGCCAGGT ATTAAGCGAC AACCTGAATG CGGGCAGTCG CACCATCGCT
TTCCAACAAA GTTTGTTTCT CAACGCCTTT GCCCTGATTG AATTTTTCAA AGCCGTACTA
CGCCTGATTT TTTGCCCAAA CGTGGCTGAA CTGCGCCCGT TCACGATTCA TGACGAGACC
GCCCGTTACT GGAGCCGTCG CCTGAGCTGG TTAAGCAGCC TGATTGGCTA TGGCCTGATT
GTGGCCGTGC CGATTATCTC TAATCAGGTG AATGTACAGA TAGGTGCGCT GGCGAACGTC
ATCATTATGC TGTGCATGAC GGTCTGGGCG CTGTACCTGA TCTTTCGTAA TAAAAAAGAG
ATTACCCAGC ATTTGCTCAA CTTCGCGGAG CATTCGCTGG CCTTTTTCAG CCTGTTTATC
CGCGCCTTTG CGCTGGTGTG GCACTGGCTG GCAAGCGCCT ATTTTATCGT GCTGTTTTTC
TTTTCGTTGT TCGATCCGGG CAACAGCCTG AAATTTATGA TGGGTGCAAC GGTGCGCAGC
CTGGCGATTA TTGGTATCGC AGCATTTGTT TCCGGTATGT TTTCCCGCTG GCTGGCGAAA
ACCATCACCC TCTCGCCACA TACTCAGCGT AACTATCCGG AGCTGCAAAA ACGGTTGAAT
GGCTGGCTGT CGGCGGCGCT GAAAACGGCG CGTATTCTGA CAGTCTGCGT GGCGGTAATG
CTGCTGTTGA GCGCATGGGG ATTGTTCGAT TTCTGGAACT GGCTGCAAAA CGGCGCGGGG
CAGAAAACCG TAGATATCCT GATCCGTATC GCACTCATTC TTTTCTTCTC GGCGGTTGGC
TGGACAGTGC TCGCCAGTTT GATCGAAAAC CGGCTGGCTT CGGATATTCA TGGCCGCCCG
CTACCCAGCG CCCGTACGCG TACCCTGCTG ACGCTGTTTC GTAACGCGCT GGCGGTGATT
ATCAGTACCA TCACCATCAT GATTGTGTTG TCGGAAATCG GCGTTAATAT CGCGCCATTG
CTGGCAGGTG CCGGGGCATT AGGTCTGGCT ATCTCGTTTG GTTCGCAAAC GCTGGTGAAA
GATATTATCA CCGGGGTATT TATTCAGTTT GAAAACGGCA TGAACACTGG AGATTTGGTG
ACTATCGGGC CGTTGACCGG CACTGTGGAA CGGATGTCGA TTCGCTCCGT GGGCGTGCGT
CAGGATACCG GGGCGTATCA CATCATTCCG TGGTCTTCGA TAACTACCTT TGCTAACTTC
GTCCGCGGCA TTGGTTCGGT GGTGGCAAAT TACGATGTTG ATCGCCATGA AGATGCTGAT
AAAGCCAATC AGGCACTGAA AGATGCGGTA GCGGAATTAA TGGAAAACGA AGAAATTCGC
GGGCTGATTA TTGGTGAACC GAATTTTGCC GGGATTGTCG GCTTAAGCAA TACCGCGTTT
ACACTGCGTG TTTCGTTCAC CACGCTGCCA CTCAAACAGT GGACGGTCCG CTTTGCCCTC
GACAGCCAGG TGAAAAAACA TTTCGACCTG GCGGGCGTTC GCGCGCCAGT GCAGACTTAT
CAGGTGCTGC CTGCTCCGGG CGCGACCCCG GCTGAACCGT TGCCGCCGGG GGAACCAACG
CTTTAA
|
|---|
| Protein sequence | MRWILFILFC LLGAPAHAVS IPGVTTTTTT DSTTEPAPEP DIEQKKAAYG ALADVLDNDT
SRKELIDQLR TVAATPPAEP VPKIVPPTLV EEQTVLQKVT EVSRHYGEAL SARFGQLYRN
ITGSPHKPFN PQTFSNALTH FSMLAVLVFV FYWLIRLCAL PLYRKMGQWA RQKNRERSNW
LQLPAMIIGA FIIDLLLLAL TLFVGQVLSD NLNAGSRTIA FQQSLFLNAF ALIEFFKAVL
RLIFCPNVAE LRPFTIHDET ARYWSRRLSW LSSLIGYGLI VAVPIISNQV NVQIGALANV
IIMLCMTVWA LYLIFRNKKE ITQHLLNFAE HSLAFFSLFI RAFALVWHWL ASAYFIVLFF
FSLFDPGNSL KFMMGATVRS LAIIGIAAFV SGMFSRWLAK TITLSPHTQR NYPELQKRLN
GWLSAALKTA RILTVCVAVM LLLSAWGLFD FWNWLQNGAG QKTVDILIRI ALILFFSAVG
WTVLASLIEN RLASDIHGRP LPSARTRTLL TLFRNALAVI ISTITIMIVL SEIGVNIAPL
LAGAGALGLA ISFGSQTLVK DIITGVFIQF ENGMNTGDLV TIGPLTGTVE RMSIRSVGVR
QDTGAYHIIP WSSITTFANF VRGIGSVVAN YDVDRHEDAD KANQALKDAV AELMENEEIR
GLIIGEPNFA GIVGLSNTAF TLRVSFTTLP LKQWTVRFAL DSQVKKHFDL AGVRAPVQTY
QVLPAPGATP AEPLPPGEPT L
|
|---|
| |