Gene EcSMS35_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0827 
Symbol 
ID6142861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp830012 
End bp830278 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content51% 
IMG OID641615715 
Producthypothetical protein 
Protein accessionYP_001742907 
Protein GI170684263 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.841992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCG GTTGGGCTAA CGATGACGCC GTCAACGAAC AGATCAACAG TACAATTGAA 
GATGCGATTG CTCGTGCCCG GGGTGAAATT CCGCGTGGCG AGAGCCTGTA TGAATGTGAA
GAGTGCGGCG CCCCCATCCC GCAGGCCCGT CGGGAAGCCA TTCCTGGCGT GCGCTTATGC
ATTCATTGTC AGCAGGATAA AGATTTACAA AAATCAGCTT ATACAGGATA TAATCGCAGA
GGTTCGAAAG ACAGCCAGTT ACGTTAA
 
Protein sequence
MASGWANDDA VNEQINSTIE DAIARARGEI PRGESLYECE ECGAPIPQAR REAIPGVRLC 
IHCQQDKDLQ KSAYTGYNRR GSKDSQLR