Gene EcSMS35_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0825 
Symbol 
ID6146484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp828262 
End bp829347 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID641615713 
Producthypothetical protein 
Protein accessionYP_001742905 
Protein GI170682957 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTG GTCATCGCTT TGATGCTCAG ACGTTGCACA GTTTTATTCA GGCTGTATTT 
CGTCAGATGG GTAGCGAGGA ACAAGAAGCG AAATTAGTTG CCGATCATTT AATCGCGGCA
AACCTGGCAG GGCATGATTC ACATGGTATT GGCATGATCC CAAGCTATGT GCGCTCCTGG
AGTCAGGGGC ATCTGCAAAT TAACCATCAT GCCAAAGTCG TTAAAGAGGC GGGGGCGGCG
GTCACGCTCG ATGGCGATCG CGCATTTGGT CAGGTCGCGG CACACGAAGC GATGGCGCTG
GGGATTGAGA AAGCGCATCA GCACGGCATT GCCGCCGTGG CGCTCCATAA CTCGCATCAT
ATCGGCCGTA TCGGTTACTG GGCGGAGCAG TGTGCAGCGG CGGGGTTTGT CTCTATCCAC
TTTGTTAGCG TGGTCGGTAT TCCAATGGTC GCGCCGTTCC ACGGTCGCGA CAGCCGCTTT
GGCACCAATC CGTTCTGTGT GATTTTCCCT CGTAAAGATA ATTTTCCGCT GTTGCTCGAT
TACGCCACCA GCGCCATTGC ATTTGGCAAA ACCCGCGTCG CCTGGCATAA AGGCGTCCCC
GTGCCGCCAG GTTGCCTGAT TGACGTTAAC GGCGTGCCGA CGACAAATCC GGCGGTAATG
CAGGAGTCGC CGTTGGGTTC GCTGTTGACC TTTGCCGAAC ATAAAGGCTA CGCCCTTGCA
GCGATGTGTG AAATTCTTGG CGGGGCGCTT TCTGGCGGTA AAACGACGCA TCAGGAAACG
TTACAAACCA GTCCCGATGC CATTCTTAAC TGCATGACCA CTATCATCAT CAACCCGGAA
CTGTTCGGCG CGCCGGATTG TAGTGCACAG ACCGAAGCCT TTGCCGAGTG GGTGAAAGCC
TCGCCGCATG ATGACGATAA GCCGATTTTG CTACCGGGCG AGTGGGAAGT GAACACGCGT
CGCGAACGGC AGGAGCAGGG GATTCCACTG GATGCGGGAA GCTGGCAGGC CATTTGTGAT
GCAGCGCGGC AGATTGGTAT GCCGGAAGAG ACGTTGCAGG CTTTCTGTCA GCAGTTAGCC
AGCTAA
 
Protein sequence
MESGHRFDAQ TLHSFIQAVF RQMGSEEQEA KLVADHLIAA NLAGHDSHGI GMIPSYVRSW 
SQGHLQINHH AKVVKEAGAA VTLDGDRAFG QVAAHEAMAL GIEKAHQHGI AAVALHNSHH
IGRIGYWAEQ CAAAGFVSIH FVSVVGIPMV APFHGRDSRF GTNPFCVIFP RKDNFPLLLD
YATSAIAFGK TRVAWHKGVP VPPGCLIDVN GVPTTNPAVM QESPLGSLLT FAEHKGYALA
AMCEILGGAL SGGKTTHQET LQTSPDAILN CMTTIIINPE LFGAPDCSAQ TEAFAEWVKA
SPHDDDKPIL LPGEWEVNTR RERQEQGIPL DAGSWQAICD AARQIGMPEE TLQAFCQQLA
S