| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0820 |
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| Symbol | |
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| ID | 6145501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 822568 |
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| End bp | 823932 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615708 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_001742900 |
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| Protein GI | 170683710 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG ATTCTTTGGG TTTAAGCCCT GATATCCTGC GCGCCGTTGC CGAGCAGGGT
TACCGTGAAC CCACCCCTAT TCAGCAGCAG GCGATCCCTG CGGTGTTGGA AGGCCGCGAC
CTGATGGCCA GCGCCCAGAC CGGCACCGGC AAAACAGCGG GCTTTACGCT GCCGCTGTTG
CAACACCTGA TCACTCGCCA GCCGCACGCC AAAGGGCGTC GTCCGGTACG TGCGCTCATT
CTTACCCCGA CCCGTGAACT GGCGGCGCAG ATTGGCGAAA ACGTCCGTGA TTACAGCAAA
TACCTGAACA TTCGTTCGCT GGTGGTGTTT GGCGGTGTCA GCATTAACCC ACAAATGATG
AAGTTGCGCG GCGGCGTTGA TGTGCTGGTG GCAACGCCGG GACGTCTGCT GGACCTGGAA
CATCAAAATG CAGTGAAGCT GGATCAGGTT GAAATCCTCG TCCTTGATGA AGCTGACCGC
ATGCTCGACA TGGGCTTTAT CCACGATATC CGTCGCGTGT TAACAAAACT GCCAGCGAAG
CGCCAGAACC TGTTGTTCTC CGCGACCTTC TCTGACGATA TTAAAGCCCT GGCGGAAAAA
CTGTTGCACA ACCCGCTGGA AATCGAAGTG GCACGCCGCA ATACTGCGTC TGATCAGGTG
ACCCAGCACG TTCACTTTGT CGATAAGAAA CGCAAACGCG AATTGCTGTC GCATATGATT
GGGAAAGGGA ACTGGCAGCA GGTGCTGGTG TTTACCCGTA CCAAACATGG CGCTAACCAT
CTGGCTGAAC AGCTTAATAA AGATGGCATC CGCAGTGCGG CGATCCACGG CAATAAATCG
CAAGGTGCGC GTACCCGTGC GCTGGCTGAT TTTAAATCGG GCGATATTCG TGTACTGGTG
GCAACTGACA TCGCTGCGCG CGGCCTGGAT ATTGAAGAGC TGCCGCACGT GGTCAACTAT
GAACTGCCAA ACGTACCGGA AGATTATGTC CACCGTATCG GGCGTACCGG TCGTGCGGCT
GCTACCGGTG AAGCGTTGTC GCTGGTGTGT GTTGATGAAC ACAAACTGCT GCGTGATATC
GAAAAACTGC TGAAAAAAGA GATCCCGCGC ATTGCGATTC CGGGTTATGA GCCGGACCCG
TCAATCAAAG CCGAACCGAT CCAGAACGGT CGCCAGCAAC GTGGCGGCGG CGGTCGTGGG
CAAGGTGGTG GTCGCGGTCA ACAGCAACCA CGCCGTGGAG AAGGTGGTGC GAAATCAGCT
AGCGCGAAGC CCGCAGAAAA AACATCTCGT CGTCTTGGTG ATGCCAAACC GGCAGGCGAA
CAACAACGCC GTCGCCGTCC GCGTAAACCT GCCGCTGCGC AGTAA
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| Protein sequence | MSFDSLGLSP DILRAVAEQG YREPTPIQQQ AIPAVLEGRD LMASAQTGTG KTAGFTLPLL
QHLITRQPHA KGRRPVRALI LTPTRELAAQ IGENVRDYSK YLNIRSLVVF GGVSINPQMM
KLRGGVDVLV ATPGRLLDLE HQNAVKLDQV EILVLDEADR MLDMGFIHDI RRVLTKLPAK
RQNLLFSATF SDDIKALAEK LLHNPLEIEV ARRNTASDQV TQHVHFVDKK RKRELLSHMI
GKGNWQQVLV FTRTKHGANH LAEQLNKDGI RSAAIHGNKS QGARTRALAD FKSGDIRVLV
ATDIAARGLD IEELPHVVNY ELPNVPEDYV HRIGRTGRAA ATGEALSLVC VDEHKLLRDI
EKLLKKEIPR IAIPGYEPDP SIKAEPIQNG RQQRGGGGRG QGGGRGQQQP RRGEGGAKSA
SAKPAEKTSR RLGDAKPAGE QQRRRRPRKP AAAQ
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