Gene EcSMS35_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0819 
Symbol 
ID6147264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand- 
Start bp821668 
End bp822339 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID641615707 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001742899 
Protein GI170681317 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.852921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC CTGCCATGAC AATCAAGGGT GAACAGGCGA AAAAACAGCT GATTGCTGCG 
GCACTGGCAC AGTTTGGTGA ATATGGAATG AACGCCACCA CCCGCGAGAT AGCCGCCCAG 
GCCGGGCAGA ATATCGCTGC CATCACCTAC TACTTCGGTT CGAAAGAAGA TTTGTACCTC 
GCCTGCGCCC AATGGATTGC CGATTTCATT GGCGAGCAGT TCCGTCCGCA CGCTGAAGAA 
GCCGAACGTT TGTTCGCACA ACCACAGCCG GATCGGGCTG CCATCCGCGA ACTGATCCTT 
CGCGCCTGCA GGAACATGAT TAAGCTGCTC ACCCAGGATG ACACCGTCAA CCTCAGCAAA 
TTTATCTCCC GTGAGCAGCT CTCTCCCACG GCAGCCTACC ACCTGGTGCA CGAACAGGTG 
ATTAGTCCGC TACACAGCCA CCTGACACGC CTGATTGCCG CCTGGACCGG CTGCGACGCT 
AGCGATACCC GCATGATCCT TCATACCCAT GCGTTGATTG GTGAGATTCT GGCGTTTCGT 
CTTGGCAAAG AAACTATTCT GTTACGTACC GGCTGGACCG CGTTCGATGA AGAAAAGACC 
GAACTGATCA ACCAGACGGT GACCTGTCAT ATTGACCTGA TTTTGCAAGG ATTATCGCAA 
AGGAGTTTGT AG
 
Protein sequence
MNNPAMTIKG EQAKKQLIAA ALAQFGEYGM NATTREIAAQ AGQNIAAITY YFGSKEDLYL 
ACAQWIADFI GEQFRPHAEE AERLFAQPQP DRAAIRELIL RACRNMIKLL TQDDTVNLSK 
FISREQLSPT AAYHLVHEQV ISPLHSHLTR LIAAWTGCDA SDTRMILHTH ALIGEILAFR 
LGKETILLRT GWTAFDEEKT ELINQTVTCH IDLILQGLSQ RSL