Gene EcSMS35_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0813 
Symbol 
ID6147143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp815432 
End bp816193 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID641615701 
Productendonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_001742893 
Protein GI170684095 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0192282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.85473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC AAACACAACA ATTTTCGTTC AAGGTGCTCA CCATCAATAT TCACAAAGGC 
TTTACCGCGT TTAACCGACG CTTCATTTTG CCGGAACTTC GCGACGCCGT GCGTACCGTC
AGTGCCGATA TTGTTTGCCT GCAGGAAGTG ATGGGCGCGC ACGAAGTTCA TCCGCTGCAT
GTGGAAAACT GGCCCGATAC CTCGCACTAC GAGTTTCTCG CCGACACCAT GTGGAGCGAT
TTCGCCTACG GTCGCAATGC CGTATACCCG GAAGGACATC ACGGTAATGC GGTTCTTTCA
CGTTATCCCA TTGAACATTA TGAGAATCGT GATGTTTCGG TCGATGGTGC GGAAAAGCGC
GGCGTGCTCT ACTGCCGCAT TGTGCCGCCG ATGACCGGGA AAGCGATTCA TGTGATGTGC
GTACATCTGG GCCTGCGTGA GGCGCACCGT CAGGCGCAGC TTGCGATGCT CGCCGAATGG
GTGAATGAGC TGCCGGACGG CGAACCGGTA TTGGTGGCGG GTGATTTCAA CGACTGGCGG
CAAAAAGCTA ATCATCCGTT AAAAGTGCAG GCCGGGCTGG ATGAGATATT TACCCGCGCC
CACGGACGCC CGGCGCGCAC GTTTCCGGTG CAATTTCCTC TACTACGACT GGACAGGATC
TACGTCAAAA ATGCCAGCGC CAGCGCGCCA ACCGCGTTGC CGCTGCGGAC ATGGCGACAC
CTTTCTGATC ATGCCCCTTT AAGTGCGGAG ATTCATTTAT GA
 
Protein sequence
MPDQTQQFSF KVLTINIHKG FTAFNRRFIL PELRDAVRTV SADIVCLQEV MGAHEVHPLH 
VENWPDTSHY EFLADTMWSD FAYGRNAVYP EGHHGNAVLS RYPIEHYENR DVSVDGAEKR
GVLYCRIVPP MTGKAIHVMC VHLGLREAHR QAQLAMLAEW VNELPDGEPV LVAGDFNDWR
QKANHPLKVQ AGLDEIFTRA HGRPARTFPV QFPLLRLDRI YVKNASASAP TALPLRTWRH
LSDHAPLSAE IHL