| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0801 |
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| Symbol | bioD |
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| ID | 6145807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 804118 |
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| End bp | 804795 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615689 |
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| Product | dithiobiotin synthetase |
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| Protein accession | YP_001742881 |
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| Protein GI | 170681047 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000100914 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAAAC GTTATTTTGT CACCGGAACG GATACCGAAG TGGGGAAAAC CGTCGCCAGT
TGTGCACTTT TACAAGCCGC AAAGGCAGTA GGCTACCGGA CGGCAGGTTA TAAACCGGTC
GCCTCTGGCA GCGAAAAGAT CCCGGAAGGC TTACGTAATA GCGACGCGCT GGCGTTACAG
CGCAACAGCA GCCTGCAGCT GGATTACGCA ACGGTAAATC CTTACACCTT CGCAGAACCC
ACTTCGCCGC ACATCATCAG CGCACAAGAG GGCAGGCCGA TAGAATCATT GGTAATGAGC
GCCGGATTAC GCGCGCTTGA ACAACAGGCT GACTGGGTGT TAGTGGAAGG TGCTGGCGGC
TGGTTTACGC CGCTTTCTGA CACTTTCACT TTTGCGGATT GGGTAACACA GGAACAACTG
CCGGTGATAC TGGTAGTTGG TGTGAAACTC GGCTGTATTA ATCACGCGAT GTTGACGGCA
CAGGCAATAC AACACGCCGG ACTGACTCTG GCGGGTTGGG TGGCGAATGA TGTCACGCCT
CCGGGAAAAC GTCACGCTGA ATATATGACC ACGCTCACCC GCATGATTCC CGCTCCGCTG
CTGGGCGAAA TTCCCTGGCT TGCAGAAAAT CCAGAAAATG CGGCAACCGG AAAGTACATC
AATCTTGCCT TAATGTAG
|
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| Protein sequence | MSKRYFVTGT DTEVGKTVAS CALLQAAKAV GYRTAGYKPV ASGSEKIPEG LRNSDALALQ
RNSSLQLDYA TVNPYTFAEP TSPHIISAQE GRPIESLVMS AGLRALEQQA DWVLVEGAGG
WFTPLSDTFT FADWVTQEQL PVILVVGVKL GCINHAMLTA QAIQHAGLTL AGWVANDVTP
PGKRHAEYMT TLTRMIPAPL LGEIPWLAEN PENAATGKYI NLALM
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