| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0779 |
|---|
| Symbol | galM |
|---|
| ID | 6145327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 779807 |
|---|
| End bp | 780847 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641615667 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_001742859 |
|---|
| Protein GI | 170681719 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02636] galactose mutarotase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.184805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAACG AAACTCCCGC ACTGGCACCC GATGGTCAGC CGTACCGACT GTTAACTTTG
CGTAACAACG CAGGGATGGT AGTCACGCTG ATGGACTGGG GTGCGACTTT ACTTTCCGCC
CGTATTCCGC TTTCCGATGG CAGCGTCCGC GAGGCGCTGC TTGGCTGCGC CAGCCCGGAA
TGCTATCAGG ATCAGGCCGC ATTTCTGGGG GCCTCTATTG GTCGTTATGC CAACCGCATC
GCCAATAGCC GTTATACCTT TGACGGTGAA ACCGTGACGC TTTCGCCAAG TCAGGGCGTT
AACCAGCTGC ACGGCGGCCC GGAAGGGTTC GACAAACGTC GCTGGCAGAT TGTGAACCAG
AATGATCGTC AGGTGCTATT TGCCCTGAGT TCAGATGATG GCGATCAGGG CTTCCCGGGT
AATCTCGGCG CGACGGTGCA ATATCGTCTG ACCGACGATA ACCGTATCTC CATTACTTAT
CGCGCCACAG TTGATAAACC TTGCCCGGTG AATATGACTA ATCACGTCTA TTTCAACCTC
GACGGCGAGC AGTCTGACGT GCGCAATCAC AAGTTGCAGA TTCTGGCGGA CGAATATCTG
CCGGTTGATG AAGGCGGCAT TCCGCACGAC GGTCTGAAAT CTGTCGCCGG AACATCTTTT
GATTTCCGCA GCGCCAAAAT CATCGCCAGT GAGTTTCTTG CCGACGACGA TCAGCGCAAA
GTGAAAGGTT ACGATCACGC GTTCTTGTTA CAGGCCAAAG GCGATGGCAA GAAAGTGGCG
GCGCATGTCT GGTCAGCAGA TGAAAAATTG CAGCTGAAGG TCTACACCAC CGCTCCGGCT
CTGCAATTCT ACTCCGGCAA CTTCCTCGGC GGCACACCGT CGCGGGGAAC CGAACCTTAC
GCCGACTGGC AAGGGCTGGC TCTGGAAAGC GAATTTCTGC CGGACAGTCC GAACCACCCT
GAATGGCCGC AACCGGACTG CTTCCTGCGT CCTGGCGAAG AGTATTCCAG CCTGACGGAA
TATCAGTTTA TTGCTGAGTA A
|
|---|
| Protein sequence | MLNETPALAP DGQPYRLLTL RNNAGMVVTL MDWGATLLSA RIPLSDGSVR EALLGCASPE
CYQDQAAFLG ASIGRYANRI ANSRYTFDGE TVTLSPSQGV NQLHGGPEGF DKRRWQIVNQ
NDRQVLFALS SDDGDQGFPG NLGATVQYRL TDDNRISITY RATVDKPCPV NMTNHVYFNL
DGEQSDVRNH KLQILADEYL PVDEGGIPHD GLKSVAGTSF DFRSAKIIAS EFLADDDQRK
VKGYDHAFLL QAKGDGKKVA AHVWSADEKL QLKVYTTAPA LQFYSGNFLG GTPSRGTEPY
ADWQGLALES EFLPDSPNHP EWPQPDCFLR PGEEYSSLTE YQFIAE
|
|---|
| |