Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0763 |
Symbol | tolB |
ID | 6143437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 770335 |
End bp | 771630 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615652 |
Product | translocation protein TolB |
Protein accession | YP_001742851 |
Protein GI | 170683440 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000112892 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGC AGGCATTACG AGTAGCATTT GGTTTTCTCA TACTGTGGGC ATCAGTTCTG CATGCTGAAG TCCGCATTGT GATCGACAGC GGTGTAGATT CCGGTCGTCC TATTGGTGTT GTTCCTTTCC AGTGGGCGGG GCCTGGTGCG GCACCTGAAG ATATTGGCGG CATCGTTGCT GCTGACTTGC GTAACAGCGG TAAATTTAAT CCGTTAGATC GCGCTCGTCT GCCACAGCAG CCGGGTAGTG CGCAGGAAGT ACAACCAGCT GCATGGTCCG CACTGGGCAT TGACGCTGTA GTTGTCGGTC AGGTCACTCC GAATCCGGAC GGCTCTTACA ATGTTGCTTA TCAACTTGTT GACACTGGCG GCGCACCGGG TACTGTACTT GCTCAGAACT CGTACAAAGT GAACAAGCAG TGGCTGCGTT ATGCTGGTCA TACCGCCAGT GATGAAGTGT TTGAAAAACT GACCGGCATT AAAGGTGCGT TCCGTACCCG TATTGCCTAC GTTGTTCAGA CCAACGGCGG TCAGTTCCCG TATGAACTGC GCGTATCTGA CTATGACGGT TACAACCAGT TTGTCGTTCA CCGTTCACCG CAGCCGCTGA TGTCTCCGGC GTGGTCACCA GACGGTTCTA AACTGGCTTA TGTGACCTTC GAAAGCGGTC GTTCCGCGCT GGTTATTCAG ACGCTGGCAA ATGGCGCTGT ACGTCAGGTG GCTTCATTCC CGCGTCACAA CGGTGCACCT GCATTCTCGC CAGACGGCAG CAAACTGGCA TTCGCCTTGT CGAAAACCGG TAGTCTGAAC CTGTACGTAA TGGATTTGGC TTCTGGTCAG ATCCGCCAGG TGACTGATGG TCGCAGTAAC AATACCGAAC CGACCTGGTT CCCGGATAGC CAGAACCTGG CATTTACTTC TGACCAGGCC GGTCGTCCAC AGGTTTATAA AGTGAATATC AACGGCGGTG CGCCACAACG TATTACCTGG GAAGGTTCGC AGAACCAGGA TGCGGATGTC AGCAGCGACG GTAAATTTAT GGTAATGGTC AGCTCCAATG GTGGGCAGCA GCACATTGCC AAACAAGATC TGGCAACGGG AGGCGTACAA GTTCTGTCGT CCACGTTCCT GGATGAAACG CCAAGTCTGG CACCTAACGG CACTATGGTA ATCTACAGCT CTTCTCAGGG GATGGGATCC GTGCTGAATT TGGTTTCTAC AGATGGGCGT TTCAAAGCGC GTCTTCCGGC AACTGATGGA CAGGTCAAAT TCCCTGCCTG GTCGCCGTAT CTGTGA
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Protein sequence | MMKQALRVAF GFLILWASVL HAEVRIVIDS GVDSGRPIGV VPFQWAGPGA APEDIGGIVA ADLRNSGKFN PLDRARLPQQ PGSAQEVQPA AWSALGIDAV VVGQVTPNPD GSYNVAYQLV DTGGAPGTVL AQNSYKVNKQ WLRYAGHTAS DEVFEKLTGI KGAFRTRIAY VVQTNGGQFP YELRVSDYDG YNQFVVHRSP QPLMSPAWSP DGSKLAYVTF ESGRSALVIQ TLANGAVRQV ASFPRHNGAP AFSPDGSKLA FALSKTGSLN LYVMDLASGQ IRQVTDGRSN NTEPTWFPDS QNLAFTSDQA GRPQVYKVNI NGGAPQRITW EGSQNQDADV SSDGKFMVMV SSNGGQQHIA KQDLATGGVQ VLSSTFLDET PSLAPNGTMV IYSSSQGMGS VLNLVSTDGR FKARLPATDG QVKFPAWSPY L
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