| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0761 |
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| Symbol | tolR |
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| ID | 6145209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 768432 |
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| End bp | 768860 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615650 |
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| Product | colicin uptake protein TolR |
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| Protein accession | YP_001742849 |
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| Protein GI | 170680358 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000121219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.932499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAG CGCGTGGACG AGGTCGTCGC GATCTCAAGT CCGAAATCAA CATTGTACCG
TTGCTGGACG TACTGCTGGT GCTGTTGCTG ATCTTTATGG CGACAGCGCC CATCATCACC
CAGAGCGTGG AGGTCGATCT GCCAGACGCT ACTGAATCAC AGGCGGTGAG CAGTAACGAT
AATCCGCCAG TGATTGTTGA AGTGTCTGGT ATTGGTCAGT ACACCGTGGT GGTTGAGAAA
GATCGCCTGG AGCGTTTACC ACCAGAGCAG GTGGTGGCGG AAGTGTCCAG CCGTTTCAAG
GCCAACCCGA AAACGGTCTT TCTGATCGGT GGCGCAAAAG ATGTGCCTTA CGATGAAATA
ATTAAAGCAC TGAACTTGTT ACATAGTGCG GGTGTGAAAT CGGTTGGTTT AATGACGCAG
CCTATCTAA
|
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| Protein sequence | MARARGRGRR DLKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVDLPDA TESQAVSSND
NPPVIVEVSG IGQYTVVVEK DRLERLPPEQ VVAEVSSRFK ANPKTVFLIG GAKDVPYDEI
IKALNLLHSA GVKSVGLMTQ PI
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