Gene EcSMS35_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0756 
SymbolcydB1 
ID6145610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp765625 
End bp766764 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content54% 
IMG OID641615645 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001742844 
Protein GI170680777 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00040589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT ATGAAGTATT GCGTTTTATC TGGTGGCTGC TGGTTGGCGT TCTGCTGATT 
GGTTTTGCAG TCACTGACGG TTTCGACATG GGGGTGGGCA TGCTCACCCG TTTCCTCGGT
CGTAACGACA CCGAGCGTCG AATTATGATT AACTCCATTG CACCACACTG GGACGGTAAC
CAGGTTTGGC TGATCACCGC GGGCGGCGCA CTCTTTGCTG CCTGGCCGAT GGTCTATGCC
GCTGCGTTCT CCGGCTTCTA TGTGGCGATG ATCCTCGTGC TGGCGTCTTT GTTCTTCCGT
CCGGTCGGTT TTGACTACCG CTCCAAGATT GAAGAAACCC GCTGGCGTAA CATGTGGGAC
TGGGGCATCT TCATTGGTAG CTTCGTTCCG CCGCTGGTGA TTGGTGTAGC GTTCGGTAAC
CTGTTGCAGG GCGTACCGTT CAACGTTGAT GAATATCTGC GTCTGTACTA CACCGGTAAC
TTTTTCCAGC TGCTTAACCC GTTCGGCCTG CTGGCAGGCG TGGTGAGCGT AGGGATGATC
ATTACTCAGG GCGCAACCTA TCTGCAAATG CGTACCGTGG GCGAACTGCA CCTGCGTACC
CGTGCAACGG CTCAGGTGGC GGCACTGGTG ACACTGGTCT GCTTCGCACT GGCTGGCGTA
TGGGTGATGT ACGGTATCGA TGGTTATGTC GTGAAATCGA CAATGGACCA TTACGCAGCC
TCTAACCCGC TGAATAAAGA AGTGGTTCGT GAAGCTGGCG CATGGCTGGT TAACTTCAAC
AACACGCCAA TTCTGTGGGC TATTCCGGCA CTGGGTGTGG TTCTGCCGCT GCTGACCATC
CTGACTGCAC GTATGGATAA AGCCGCGTGG GCGTTTGTGT TCTCCTCCCT GACGCTGGCC
TGCATCATCC TGACTGCCGG TATCGCAATG TTCCCGTTTG TGATGCCGTC CAGCACCATG
ATGAACGCAA GTCTGACAAT GTGGGATGCA ACTTCCAGCC AGCTGACGCT TAACGTCATG
ACCTGGGTTG CGGTGGTTCT GGTACCGATC ATTCTGCTCT ACACCGCCTG GTGTTACTGG
AAAATGTTCG GTCGTATCAC CAAAGAAGAT ATTGAACGTA ACACCCACTC TCTGTACTAA
 
Protein sequence
MIDYEVLRFI WWLLVGVLLI GFAVTDGFDM GVGMLTRFLG RNDTERRIMI NSIAPHWDGN 
QVWLITAGGA LFAAWPMVYA AAFSGFYVAM ILVLASLFFR PVGFDYRSKI EETRWRNMWD
WGIFIGSFVP PLVIGVAFGN LLQGVPFNVD EYLRLYYTGN FFQLLNPFGL LAGVVSVGMI
ITQGATYLQM RTVGELHLRT RATAQVAALV TLVCFALAGV WVMYGIDGYV VKSTMDHYAA
SNPLNKEVVR EAGAWLVNFN NTPILWAIPA LGVVLPLLTI LTARMDKAAW AFVFSSLTLA
CIILTAGIAM FPFVMPSSTM MNASLTMWDA TSSQLTLNVM TWVAVVLVPI ILLYTAWCYW
KMFGRITKED IERNTHSLY