| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0745 |
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| Symbol | |
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| ID | 6143162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 751810 |
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| End bp | 753462 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641615634 |
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| Product | tartrate/fumarate family Fe-S type hydro-lyase |
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| Protein accession | YP_001742833 |
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| Protein GI | 170679952 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.517956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC CATTTATCTG GCAAGAACCG TTTCTACAAA ATAAAGACGG TACAGAATAT
ACATTAATTA GCGATCAACA TATTACAGTA ACGGAATTAG ACGGCGAAGA AGTGATAAAA
ATCGCTCCTG AAGCATTAAC GCTGCTTGCC CGGCAGGCAT TTTATGAAGC CTCTTTTTTC
TTACGTTCCG CTCATTTGCA ACAGGTCGCC AGCATTCTTA ACGATCCGCA CGCCAGTAGT
AATGATAAAT ACGTTGCGTT GCAGTTATTA CGTAATGCTG AAGTCTCAGC AAAAGGGGTA
TTACCCAACT GTCAGGATAC CGGCACCGCA ACTATTGTTG CCAGTAAAGG GCAACAGATA
TGGACCGGAG GTAACGACGC TGAAGCCTTA AGCAAAGGCA TTTACACCAC TTTTCAGGAA
AATAATCTGC GCTTTTCACA AAATGCGCCA CTGGATATGT TTACCGAAGT CAATACGCAA
ACCAATCTCC CGGCGCAGAT TGATATCAGC GCCGTCGCTG GTGATGAGTA CCATTTTCTC
TGTATTAATA AAGGGGGCGG CTCTGCCAAT AAAGCCGCGC TTTATCAGGA AACCAAATCC
CTATTGCAAC CAGAAAAACT GACCGCATTT TTAATCGAAA AAATGAAATC GCTGGGCACC
GCTGCCTGCC CGCCTTACCA CATCGCCTTT GTCGTCGGAG GGCTTTCAGC CGATCAAACC
TTAAAAGTTG CCAAGCTGGC CTCAACGAAA TATTACGACA ATTTGCCCAC CAGCGGAAAC
GAGCAAGGAC AAGCATTCCG TGATATTGAG CTGGAAAAAG TATTGCTCGA GGCCAGTCAG
CAATTTGGTA TTGGTGCGCA ATTTGGGGGT AAATATTTCG CTCATGATAT TCGCGTCATT
CGTCTGCCGC GTCACGGTGG CTCTTGCCCG ATAGCTATGG CGCTCTCCTG TTCTGCGGAT
CGCAATATCA AAGCAAAAAT TAACAAGCAC GGTATCTGGC TGGAAAAACT CGAACACAAT
CCGGGGCAAT ATATTCCAGC CTCACTGCGG GAAGAAAATC ACGCGCAACA TGTACAGCTG
GATCTAAACC GTCCGTTGCG TGACGTGATG CAGGATCTCG CCAGATTACC GGTAGGCACC
CGCGTGTCGT TAAGTGGTCC CATCGTAGTG GCGCGCGATA TCGCCCACGC CAAAATAAAA
GCGCGGCTGG ATAGCGGCGA ACCGATGCCG GATTACCTGA AGCATCATAT TGTCTATTAC
GCTGGCCCGG CGAAAACACC GGAGAACATG GCCTGCGGTT CACTGGGTCC AACCACGGGC
GGTCGAATGG ACGGTTATGT CGATACCTTC CAGGCGGCTG GCGGCAGTCT GGTGATGTTA
TCGAAAGGTA ACCGCAGCCA GCAGGTCACC GATGCCTGTC ACAAACATGG CGGCTTCAAT
CTGGGGAGTA TTGGCGGTGC AGCTGCGTTA CTGGCGCAAG AATATGTCAA AAGTCTGCGT
TGCCTGGAAT ACCCGGAGCT GGGTATGGAA GCGGTGTGGA TGATGGAAGT GGAAAATTTA
CCCGCATTCA TCCTGGTAGA TGATAAAGGC AATAATTTCT TTAGTCAGTT TGAGCAGCAA
CACCGCTGCG CCAGTTGCCC TGCGGGACAT TAA
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| Protein sequence | MSKPFIWQEP FLQNKDGTEY TLISDQHITV TELDGEEVIK IAPEALTLLA RQAFYEASFF
LRSAHLQQVA SILNDPHASS NDKYVALQLL RNAEVSAKGV LPNCQDTGTA TIVASKGQQI
WTGGNDAEAL SKGIYTTFQE NNLRFSQNAP LDMFTEVNTQ TNLPAQIDIS AVAGDEYHFL
CINKGGGSAN KAALYQETKS LLQPEKLTAF LIEKMKSLGT AACPPYHIAF VVGGLSADQT
LKVAKLASTK YYDNLPTSGN EQGQAFRDIE LEKVLLEASQ QFGIGAQFGG KYFAHDIRVI
RLPRHGGSCP IAMALSCSAD RNIKAKINKH GIWLEKLEHN PGQYIPASLR EENHAQHVQL
DLNRPLRDVM QDLARLPVGT RVSLSGPIVV ARDIAHAKIK ARLDSGEPMP DYLKHHIVYY
AGPAKTPENM ACGSLGPTTG GRMDGYVDTF QAAGGSLVML SKGNRSQQVT DACHKHGGFN
LGSIGGAAAL LAQEYVKSLR CLEYPELGME AVWMMEVENL PAFILVDDKG NNFFSQFEQQ
HRCASCPAGH
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