Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0736 |
Symbol | sdhA |
ID | 6143566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 740732 |
End bp | 742498 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641615625 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001742824 |
Protein GI | 170681511 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGTGG CGCAGGTATG CGCGCGGCGC TGCAAATTTC CCAGAGCGGT CAGACCTGTG CGCTGCTCTC TAAAGTCTTC CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC CATGAAGATA ACTGGGAATG GCATATGTAC GATACCGTAA AAGGGTCGGA CTATATCGGT GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA CACATGGGCC TGCCGTTTTC GCGTCTTGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGTA CTGCGGCGGC TGCTGACCGT ACCGGTCACG CACTGTTGCA CACCCTTTAT CAGCAAAACC TGAAAAACCA CACCACCATT TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTCGGTTGT ACCGCACTGT GCATCGAAAC TGGTGAAGTG GTTTACTTCA AAGCTCGCGC TACCGTGCTG GCGACTGGCG GGGCAGGGCG TATTTATCAG TCCACCACCA ACGCCCACAT TAACACTGGC GACGGTGTCG GCATGGCTAT CCGTGCAGGC GTACCGGTAC AGGATATGGA AATGTGGCAG TTCCACCCGA CCGGTATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC AAAGACCTGG CGGGCCGTGA TGTGGTGGCG CGTTCCATCA TGATCGAAAT CCGTGAAGGT CGCGGCTGTG ATGGTCCGTG GGGGCCACAC GCGAAACTGA AACTCGATCA CCTGGGTAAA GAAGTTCTCG AATCCCGTCT GCCGGGCATC CTGGAGCTTT CCCGTACCTT CGCTCACGTT GATCCGGTGA AAGAGCCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGCGGTATT CCGACCAAAG TGACCGGTCA GGCGCTGACG GTGAACGAGA AAGGCGAAGA TGTGGTTGTT CCGGGGCTGT TTGCCGTTGG TGAAATCGCT TGTGTATCGG TACACGGCGC TAACCGTCTG GGCGGCAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGCG CAGCGGGTCT GCATCTGCAA GAGTCTATCG CCGAGCAGGG CGCACTGCGC GATGCCAGCG AGTCTGATGT AGAAGCGTCT CTGGATCGCC TGAACCGCTG GAACAACAAC CGTAACGGTG AAGATCCGGT GGCGATCCGT AAAGCACTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG GCGAAAGGTC TTGAGCAGTT GAAAGTTATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGCC TGGAACTGGA TAACCTGATG GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCGCAT AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG CCTGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA TTCCCGCCGA AGATTCGTAC TTACTAA
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Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY
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