Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0734 |
Symbol | sdhC |
ID | 6147465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 739987 |
End bp | 740391 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641615623 |
Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
Protein accession | YP_001742822 |
Protein GI | 170679876 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.934433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGCGT TATTCATGAT AAGAAATGTG AAAAAACAAA GACCTGTTAA TCTGGACCTA CAGACCATCC GGTTCCCCGT CACGGCGATA GCGTCCATTC TCCATCGCGT TTCCGGTGTG ATCACCTTTG TTGCAGTGGG CATCCTGCTG TGGCTTCTGG GTACCAGCCT CTCTTCCCCT GAAGGTTTCG AGCAAGCTTC TGCGATTATG GGCAGCTTCT TCGTCAAATT TATCATGTGG GGCATCCTTA CCGCTCTGGC GTATCACGTC GTCGTAGGTA TTCGCCACAT GATGATGGAT TTTGGCTATC TGGAAGAAAC ATTCGAAGCG GGTAAACGCT CCGCCAAAAT CTCCTTTGTT ATTACTGTCG TGCTTTCACT TCTCGCAGGA GTCCTCGTAT GGTAA
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Protein sequence | MWALFMIRNV KKQRPVNLDL QTIRFPVTAI ASILHRVSGV ITFVAVGILL WLLGTSLSSP EGFEQASAIM GSFFVKFIMW GILTALAYHV VVGIRHMMMD FGYLEETFEA GKRSAKISFV ITVVLSLLAG VLVW
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