| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0732 |
|---|
| Symbol | gltA |
|---|
| ID | 6146855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 738010 |
|---|
| End bp | 739293 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641615622 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_001742821 |
|---|
| Protein GI | 170683629 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.482725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.945982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA CAAAAGCAAA ACTCACCCTC AACGGGGACA CAGCTGTTGA ACTGGATGTG
CTGAAAGGCA CGCTGGGTCA AGATGTTATT GATATCCGTA CTCTCGGTTC AAAAGGTGTG
TTCACCTTTG ACCCAGGCTT CACTTCAACC GCATCCTGCG AATCTAAAAT TACTTTTATT
GATGGTGATG AAGGTATTTT GCTGCACCGC GGTTTCCCGA TCGATCAGCT GGCGACCGAT
TCTAACTACC TGGAAGTTTG TTACATCCTG CTGAATGGTG AAAAACCAAC TCAGGAACAG
TATGACGAAT TTAAAACTAC GGTGACCCGT CATACCATGA TCCACGAGCA GATTACCCGT
CTGTTCCATG CTTTCCGTCG CGACTCGCAT CCAATGGCAG TCATGTGTGG TATTACCGGC
GCGCTGGCGG CGTTCTATCA CGACTCGCTG GATGTTAACA ATCCTCGTCA TCGTGAAATT
GCCGCGTTCC GCCTGCTGTC GAAAATGCCG ACCATGGCCG CGATGTGTTA CAAGTATTCC
ATTGGTCAGC CATTCGTTTA CCCGCGCAAC GATCTCTCCT ATGCCGGTAA CTTCCTGAAT
ATGATGTTCT CCACGCCGTG CGAACCGTAT GAAGTTAATC CGATTCTGGA ACGTGCTATG
GACCGTATTC TGATCCTGCA CGCTGACCAT GAACAGAACG CCTCTACCTC CACCGTGCGT
ACCGCTGGCT CTTCGGGGGC GAACCCGTTT GCCTGTATCG CAGCAGGTAT TGCTTCACTG
TGGGGACCTG CGCACGGTGG TGCTAACGAA GCGGCGCTGA AAATGCTGGA AGAAATCAGC
TCCGTTAAAC ACATTCCGGA ATTTGTTCGT CGTGCGAAAG ACAAAAATGA CTCTTTCCGC
CTGATGGGCT TCGGGCACCG CGTGTACAAA AATTACGACC CGCGCGCCAC CGTAATGCGT
GAAACCTGCC ATGAAGTGCT GAAAGAGCTG GGTACCAAAG ATGACCTGCT GGAAGTGGCT
ATGGAGCTGG AAAACATCGC GCTGAACGAC CCGTACTTTA TCGAGAAGAA ACTCTACCCG
AACGTCGATT TCTACTCTGG TATCATCCTG AAAGCGATGG GTATTCCGTC TTCTATGTTC
ACCGTGATCT TCGCGATGGC GCGTACCGTT GGCTGGATCG CCCACTGGAG CGAAATGCAC
AGTGACGGTA TGAAGATTGC CCGTCCGCGT CAGCTGTATA CAGGATATGA AAAACGCGAC
TTTAAAAGCG ATATCAAGCG TTAA
|
|---|
| Protein sequence | MADTKAKLTL NGDTAVELDV LKGTLGQDVI DIRTLGSKGV FTFDPGFTST ASCESKITFI
DGDEGILLHR GFPIDQLATD SNYLEVCYIL LNGEKPTQEQ YDEFKTTVTR HTMIHEQITR
LFHAFRRDSH PMAVMCGITG ALAAFYHDSL DVNNPRHREI AAFRLLSKMP TMAAMCYKYS
IGQPFVYPRN DLSYAGNFLN MMFSTPCEPY EVNPILERAM DRILILHADH EQNASTSTVR
TAGSSGANPF ACIAAGIASL WGPAHGGANE AALKMLEEIS SVKHIPEFVR RAKDKNDSFR
LMGFGHRVYK NYDPRATVMR ETCHEVLKEL GTKDDLLEVA MELENIALND PYFIEKKLYP
NVDFYSGIIL KAMGIPSSMF TVIFAMARTV GWIAHWSEMH SDGMKIARPR QLYTGYEKRD
FKSDIKR
|
|---|
| |