| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0729 |
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| Symbol | abrB |
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| ID | 6147413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 736291 |
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| End bp | 737337 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615620 |
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| Product | protein AbrB |
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| Protein accession | YP_001742819 |
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| Protein GI | 170681894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3180] Putative ammonia monooxygenase |
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| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.218547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.802179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTTT TGCAGTGGGG AATGTTATGT GTGCTCTCAC TTCTACTTTC TATTGGCTTC
CTCGGATTAC ATCTCCCGGC GGCGCTATTA CTTGGGCCGA TGCTCGCCGG GATCATCTTC
AGTATGCGCG GAATTACTTT ACAACTCCCC CGCTCCGCTT TTCTCGCCGC GCAGGCCATT
CTTGGCTGCA TGATTGCGCA AAACCTGACC GGTTCGATCC TGACCACGCT AGCGGTGAAC
TGGCCGATTG TGTTAGCTAT TTTACTGGTG ACGCTGCTTT CCAGCGCCAT CGTGGGTTGG
TTATTGGTGC GCTATAGCTC ATTGCCTGGA AATACCGGTG CCTGGGGTTC TTCTCCTGGC
GGCGCGGCGG CAATGGTCGC TATGGCGCAA GATTACGGCG CAGATATTCG CCTGGTGGCG
TTTATGCAAT ATCTGCGCGT GCTGTTCGTC GCGGGGGCCG CTGTTCTGGT CACCCGCATG
ATGCTGGGCG ATAACGCTGA AGCGGTTAAC CAGCAGATCG TCTGGTTCCC GCCAGTGAGC
ATTAATCTCC TGCTTACGAT TTTGCTCGCG GTCGTTGCCG GTACGGCGGG ATGCTTGCTA
CGTCTTCCTT CCGGCACGAT GCTCATCCCG ATGCTGGCGG GCGCAGTGCT CCAGTCTGGT
CAGCTCATCA CCATCGAACT ACCAGAATGG CTGCTGGCGA TGGCGTATAT GGCAATTGGC
TGGCGGATTG GTCTTGGTTT CGATAAGCAA ATCTTACTGC GGGCATTGCG CCCGCTGCCA
CAAATCTTGC TGTCGATTTT TGCTCTGCTG GCTATTTGTG CAGGTATGGC GTGGGGACTG
ACCCGATTTA TGCATATTGA TTTTATGACT GCCTACCTCG CCACCAGTCC CGGCGGGCTT
GATACCGTGG CGGTCATCGC CGCAGGGAGC AATGCCGATA TGGCGCTCAT CATGGCGATG
CAAACCCTGC GCCTGTTCAG TATTTTGCTA ACGGGGCCTG CCATCGCACG GTTTATTTCA
ACCTATGCGC CGAAGCGTTC GGCCTAG
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| Protein sequence | MPVLQWGMLC VLSLLLSIGF LGLHLPAALL LGPMLAGIIF SMRGITLQLP RSAFLAAQAI
LGCMIAQNLT GSILTTLAVN WPIVLAILLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG
GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV AGAAVLVTRM MLGDNAEAVN QQIVWFPPVS
INLLLTILLA VVAGTAGCLL RLPSGTMLIP MLAGAVLQSG QLITIELPEW LLAMAYMAIG
WRIGLGFDKQ ILLRALRPLP QILLSIFALL AICAGMAWGL TRFMHIDFMT AYLATSPGGL
DTVAVIAAGS NADMALIMAM QTLRLFSILL TGPAIARFIS TYAPKRSA
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