| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0714 |
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| Symbol | potE |
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| ID | 6145530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 716182 |
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| End bp | 717501 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615604 |
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| Product | putrescine transporter |
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| Protein accession | YP_001742803 |
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| Protein GI | 170683462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0136028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.578449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA CTAAATCGAA CAAGATGGGC GTCGTTCAGT TAACCATACT GACGATGGTC
AACATGATGG GCTCCGGTAT CATCATGCTG CCGACAAAGC TTGCCGAAGT TGGGACAATC
TCAATTATCT CCTGGCTGGT GACAGCCGTA GGCTCAATGG CACTGGCGTG GGCATTCGCA
AAATGCGGTA TGTTCAGCCG TAAGGCAGGT GGTATGGGCG GTTATGCGGA GTATGCTTTC
GGTAAATCCG GTAACTTTAT GGCGAACTAC ACCTACGGTG TCTCGCTGCT GATTGCTAAC
GTCGCGATTG CTATTTCGGC GGTTGGTTAC GGCACCGAAC TGCTCGGCGC GAGTTTGTCG
CCAGTGCAGA TTGGTCTTGC GACCATCGGG GTGCTGTGGA TTTGTACCGT GGCTAACTTC
GGTGGTGCGC GCATTACCGG GCAAATCAGT AGCATTACTG TGTGGGGGGT AATCATTCCG
GTCGTCGGTC TGTGCATTAT CGGCTGGTTC TGGTTTAGCC CGACGCTGTA CGCTAACTCA
TGGAACCCTC ATCATGTACC GTTCTTTAGC GCTGTAGGTT CCTCCATCGC CATGACGTTG
TGGGCTTTCC TCGGTCTGGA GTCTGCCTGT GCCAACGCCG AAGTAGTGGA AAACCCGGAA
CGTAACGTGC CAATAGCAGT CCTTGGCGGT ACGTTAGGTG CGGCAGTGAT TTATATCGTC
TCCACCAACG TGATTGCCGG GATTGTGCCC AATATGGAGC TGGCAAATTC AACGGCACCA
TTTGGCCTGG CCTTCGCACA GATGTTCACA CCAGAAGTGG GTAAAGTCAT TATGGCGCTG
ATGGTGATGT CCTGCTGCGG TTCACTGCTT GGCTGGCAGT TCACCATTGC CCAGGTGTTT
AAATCTTCAT CTGATGAAGG CTACTTCCCT AAAATTTTCT CCCGTGTAAC CAAAGTGGAT
GCACCGGTTC AGGGAATGTT GATCATTGTG ATTATTCAGA GTGGATTGGC ACTGATGACC
ATTAGCCCGT CACTGAACAG CCAGTTCAAC GTGCTGGTTA ACCTGGCCGT GGTGACCAAT
ATCATCCCGT ATATTCTGTC GATGGCAGCA TTAGTTATTA TTCAGCAGGT CGCCAATGTG
CCACCGTCAA AAGCGAAAGT AGCAAACTTT GTTGCCTTTG TTGGTGCGAT GTACAGTTTC
TATGCGCTGT ACTCATCCGG GGAAGAAGCC ATGCTGTACG GTTCCATCGT GACCTTCCTT
GGTTGGACAC TGTATGGTCT GGTATCTCCA CGCTTTGAAC TGAAAAATAA ACACGGTTAA
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| Protein sequence | MSQTKSNKMG VVQLTILTMV NMMGSGIIML PTKLAEVGTI SIISWLVTAV GSMALAWAFA
KCGMFSRKAG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELLGASLS
PVQIGLATIG VLWICTVANF GGARITGQIS SITVWGVIIP VVGLCIIGWF WFSPTLYANS
WNPHHVPFFS AVGSSIAMTL WAFLGLESAC ANAEVVENPE RNVPIAVLGG TLGAAVIYIV
STNVIAGIVP NMELANSTAP FGLAFAQMFT PEVGKVIMAL MVMSCCGSLL GWQFTIAQVF
KSSSDEGYFP KIFSRVTKVD APVQGMLIIV IIQSGLALMT ISPSLNSQFN VLVNLAVVTN
IIPYILSMAA LVIIQQVANV PPSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL
GWTLYGLVSP RFELKNKHG
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