| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0703 |
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| Symbol | |
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| ID | 6145855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 707579 |
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| End bp | 708985 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615593 |
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| Product | OprD family outer membrane porin |
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| Protein accession | YP_001742792 |
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| Protein GI | 170680096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000220662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.949628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGT TTAGTGGCAA ACGTAGTACG CTGGCGCTGG CTATCGCCGG TGTTACAGCT
ATGTCGGGCT TTATGGCAAT TCCGGAGGCT CGCGCCGAAG GATTCATCGA CGATTCAACC
TTAACCGGCG GTATCTATTA CTGGCAGCGT GAACGCGACC GTAAAGATGT TACCGACGGC
GACAAATATA AAACCAACCT TTCTCACTCC ACCTGGAACG CTAATCTCGA TTTTCAGTCT
GGCTATGCCG CTGATATGTT CGGTCTGGAT ATTGCCGCGT TTACAGCGAT TGAAATGGCA
GAAAACGGCG ACAGCTCTCA CCCGAACGAA ATCGCGTTTT CAAAAAGTAA TAAAGCCTAT
GACGAAGACT GGTCCGGCGA TAAAAGCGGT ATAAGTCTGT ATAAAGCGGC GGCTAAATTT
AAATACGGTC CGGTTTGGGC GAGGGCAGGT TACATTCAGC CAACTGGTCA AACGCTGTTA
GCGCCGCACT GGAGCTTTAT GCCGGGTACT TATCAGGGGG CGGAAGCCGG GGCGAATTTT
GATTATGGCG ATGCTGGTGC GTTGAGTTTC TCCTACATGT GGACCAACGA ATACAAAGCA
CCGTGGCATC TGGAAATGGA TGAGTTTTAT CAGAACGATA AAACCACCAA AGTTGATTAT
CTACACTCCC TTGGGGCGAA GTACGACTTC AAAAATAACT TCGTACTGGA AGCGGCGTTT
GGTCAGGCCG AAGGGTATAT CGATCAATAT TTTGCCAAAG CCAGCTACAA ATTTGATATC
GCCGGTAGCC CGTTAACCAC CAGCTACCAG TTCTATGGTA CGCGCGATAA AGTTGACGAT
CGCAGCGTCA ACGATCTTTA TGACGGCACC GCCTGGCTGC AGGCGTTGAC CTTTGGTTAC
CGGGCGGCTG ACGTAGTGGA TTTGCGCCTC GAAGGTACCT GGGTTAAGGC TGACGGTCAG
CAGGGATACT TCCTGCAACG TATGACTCCA ACCTACGCTT CCTCGAACGG TCGCCTGGAT
ATCTGGTGGG ATAACCGTTC CGACTTCAAC GCCAACGGCG AAAAAGCGAT CTTCTTCGGT
GCGATGTATG ACCTGAAAAA CTGGAATCTT CCAGGCTTCG CCATCGGCGC TTCCTACGTT
TACGCATGGG ATGCTAAACC TGCGACCTGG CAGAGCAATC CGGATGCGTA CTACGATAAA
AACCGGACTA TTGAAGAGTC TGCCTACAGC CTGGATGCGG TGTACACCAT TCAGGACGGT
CGCGCCAAAG GCACGATGTT CAAACTGCAC TTCACCGAAT ACGACAACCA CTCCGACATC
CCAAGCTGGG GCGGTGGTTA CGGCAACATC TTCCAGGATG AGCGTGACGT GAAATTTATG
GTAATCGCAC CATTCACCAT CTTCTGA
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| Protein sequence | MRAFSGKRST LALAIAGVTA MSGFMAIPEA RAEGFIDDST LTGGIYYWQR ERDRKDVTDG
DKYKTNLSHS TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSSHPNE IAFSKSNKAY
DEDWSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGANF
DYGDAGALSF SYMWTNEYKA PWHLEMDEFY QNDKTTKVDY LHSLGAKYDF KNNFVLEAAF
GQAEGYIDQY FAKASYKFDI AGSPLTTSYQ FYGTRDKVDD RSVNDLYDGT AWLQALTFGY
RAADVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAIFFG
AMYDLKNWNL PGFAIGASYV YAWDAKPATW QSNPDAYYDK NRTIEESAYS LDAVYTIQDG
RAKGTMFKLH FTEYDNHSDI PSWGGGYGNI FQDERDVKFM VIAPFTIF
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