| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0701 |
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| Symbol | nagE |
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| ID | 6146947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 703324 |
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| End bp | 705270 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615590 |
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| Product | PTS system N-acetyl glucosamine specific transporter subunits IIABC |
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| Protein accession | YP_001742789 |
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| Protein GI | 170681159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.179782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TAGGTTTTTT CCAGCGACTC GGTAGGGCGT TACAGCTCCC TATCGCGGTG
CTGCCGGTGG CGGCGCTGTT GCTGCGATTC GGTCAGCCAG ATTTACTTAA CGTTGCGTTT
ATTGCCCAGG CGGGCGGTGC GATTTTTGAT AACCTCGCAT TAATCTTCGC CATCGGTGTG
GCATCCAGCT GGTCGAAAGA CAGCGCAGGT GCGGCGGCAC TGGCGGGTGC GGTAGGTTAC
TTTGTGTTAA CCAAAGCGAT GGTGACCATC AACCCAGAAA TTAACATGGG TGTACTGGCG
GGTATCATTA CCGGTCTGGT TGGTGGCGCA GCTTATAACC GTTGGTCCGA TATTAAACTG
CCGGACTTCC TGAGTTTCTT CGGCGGCAAA CGCTTTGTGC CGATTGCCAC CGGCTTCTTC
TGCCTGGTGC TGGCGGCCAT TTTTGGTTAC GTCTGGCCGC CGGTACAGCA CGCTATCCAT
GCAGGCGGCG AGTGGATCGT TTCTGCGGGC GCGCTGGGTT CCGGTATCTT TGGTTTCATC
AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTACTGA ACACCATCGC CTGGTTCCAG
ATTGGTGAAT TCACCAACGC GGCGGGTACG GTTTTTCACG GTGACATCAA CCGCTTCTAT
GCCGGTGACG GCACCGCGGG GATGTTCATG TCCGGCTTCT TCCCGATCAT GATGTTCGGT
CTGCCGGGTG CGGCGCTGGC GATGTACTTT GCAGCACCGA AAGAGCGCCG TCCGATGGTT
GGCGGGATGC TGCTTTCTGT TGCTGTTACT GCGTTCCTGA CCGGTGTGAC TGAGCCGCTG
GAATTCCTGT TCATGTTCCT TGCACCGCTG CTGTACCTCC TGCACGCACT GCTGACCGGT
ATCAGCCTGT TTGTGGCAAC GTTGCTGGGT ATCCATGCCG GCTTCTCTTT CTCTGCGGGG
GCTATCGACT ACGCGTTGAT GTATAACCTG CCGGCCGCCA GCCAGAACGT CTGGATGCTG
CTGGTGATGG GGGTTGTCTT CTTCGCTATC TACTTCGTGG TGTTCAGTTT GGTTATCCGC
ATGTTCAACC TGAAAACGCC AGGTCGTGAA GATAAAGAAG ACGAGATCGT TACTGAAGAG
GCTAACAGCA ATACTGAAGA AGGTCTCAAT CAACTGGCAA CCAACTATAT TGCTGCGGTT
GGCGGCACTG ACAACCTGAA AGCAATTGAC GCCTGTATCA CCCGTCTGCG CCTTACAGTG
GCTGACTCTG CCCGCGTTAA CGATACGATG TGTAAACGTC TGGGTGCTTC TGGGGTAGTG
AAACTGAACA AACAGACTAT TCAGGTGATT GTTGGCGCGA AAGCAGAATC CATCGGCGAT
GCGATGAAGA AAGTCGTTGC CCGCGGTCCG GTAGCCGCTG CCTCTGCTGA AACTGCTCCG
GCAACTGCCG CGCCTGTAGC AAAACCGCAG GCTGTACCAA ACGCAGTATC TATCGCGGAG
CTGGTATCGC CGATTACCGG TGATGTTGTG GCACTGGATC AGGTTCCTGA CGAAGCATTC
GCCAGCAAAG CGGTGGGTGA CGGTGTGGCG GTGAAACCGA CAGATAAAAT CGTCGTATCA
CCAGCCGCAG GGACTATCGT GAAAATCTTC AACACCAACC ACGCATTCTG CCTGGAAACT
GAAAAAGGCG CGGAGATTGT CGTCCATATG GGTATCGACA CCGTAGCGCT GGAAGGTAAA
GGCTTTAAAC GTCTGGTGGA AGAGGGCGCG CAAGTAAGCG CAGGGCAACC GATTCTGGAA
ATGGATCTGG ATTATCTGAA CGAAAACGCC CGCTCGATGA TTAGCCCGGT GGTTTGCAGC
AATATCGACG ATTTCAGCGG CTTGATCATT AAAGCTCAGG GCCATGTCGT GGCGGGTCAA
ACGCCGCTGT ATGAAATCAA AAAGTAA
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| Protein sequence | MNILGFFQRL GRALQLPIAV LPVAALLLRF GQPDLLNVAF IAQAGGAIFD NLALIFAIGV
ASSWSKDSAG AAALAGAVGY FVLTKAMVTI NPEINMGVLA GIITGLVGGA AYNRWSDIKL
PDFLSFFGGK RFVPIATGFF CLVLAAIFGY VWPPVQHAIH AGGEWIVSAG ALGSGIFGFI
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT VFHGDINRFY AGDGTAGMFM SGFFPIMMFG
LPGAALAMYF AAPKERRPMV GGMLLSVAVT AFLTGVTEPL EFLFMFLAPL LYLLHALLTG
ISLFVATLLG IHAGFSFSAG AIDYALMYNL PAASQNVWML LVMGVVFFAI YFVVFSLVIR
MFNLKTPGRE DKEDEIVTEE ANSNTEEGLN QLATNYIAAV GGTDNLKAID ACITRLRLTV
ADSARVNDTM CKRLGASGVV KLNKQTIQVI VGAKAESIGD AMKKVVARGP VAAASAETAP
ATAAPVAKPQ AVPNAVSIAE LVSPITGDVV ALDQVPDEAF ASKAVGDGVA VKPTDKIVVS
PAAGTIVKIF NTNHAFCLET EKGAEIVVHM GIDTVALEGK GFKRLVEEGA QVSAGQPILE
MDLDYLNENA RSMISPVVCS NIDDFSGLII KAQGHVVAGQ TPLYEIKK
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