Gene EcSMS35_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0680 
SymbolcorC 
ID6145263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp690363 
End bp691241 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID641615570 
Productmagnesium and cobalt efflux protein CorC 
Protein accessionYP_001742776 
Protein GI170682729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4535] Putative Mg2+ and Co2+ transporter CorC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.262474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACAATTCACA CAGTAGTGAC ACGATAAGCA ACAAGAAGGG ATTTTTCTCC 
CTGTTACTCA GCCAACTTTT CCACGGTGAA CCGAAAAACC GTGACGAACT GCTGGCGCTG
ATCCGTGATT CCGGGCAGAA CGACCTTATC GACGAAGATA CGCGCGATAT GCTCGAAGGG
GTGATGGACA TCGCAGACCA ACGCGTCCGC GACATCATGA TCCCCCGCTC CCAGATGATT
ACCCTGAAAC GCAACCAGAC GCTGGACGAA TGCCTTGATG TCATCATTGA GTCCGCCCAC
TCACGTTTCC CGGTGATTAG CGAAGACAAA GATCACATTG AAGGGATTCT GATGGCGAAA
GACTTGCTGC CGTTTATGCG CAGCGATGCT GAAGCCTTCA GCATGGACAA AGTGTTACGT
CAGGCGGTTG TCGTTCCTGA AAGTAAGCGC GTAGACCGGA TGCTGAAAGA GTTTCGCTCT
CAGCGTTACC ACATGGCGAT CGTCATTGAC GAATTCGGTG GAGTTTCCGG TCTGGTGACC
ATTGAAGACA TCCTGGAACT GATTGTTGGT GAGATTGAAG ACGAGTATGA CGAAGAAGAT
GATATCGACT TCCGTCAGCT GAGTCGTCAT ACCTGGACCG TGCGCGCACT GGCTTCTATT
GAAGACTTCA ACGAAGCGTT CGGCACCCAC TTTAGCGATG AAGAGGTTGA CACTATCGGT
GGTCTGGTGA TGCAGGCATT TGGGCATCTT CCGGCGCGTG GCGAAACCAT CGACATCGAC
GGTTACCAGT TCAAAGTGGC GATGGCCGAC AGTCGGCGTA TTATTCAGGT TCATGTCAAA
ATCCCGGATG ACTCACCCCA GCCGAAGCTG GATGAATAA
 
Protein sequence
MSDDNSHSSD TISNKKGFFS LLLSQLFHGE PKNRDELLAL IRDSGQNDLI DEDTRDMLEG 
VMDIADQRVR DIMIPRSQMI TLKRNQTLDE CLDVIIESAH SRFPVISEDK DHIEGILMAK
DLLPFMRSDA EAFSMDKVLR QAVVVPESKR VDRMLKEFRS QRYHMAIVID EFGGVSGLVT
IEDILELIVG EIEDEYDEED DIDFRQLSRH TWTVRALASI EDFNEAFGTH FSDEEVDTIG
GLVMQAFGHL PARGETIDID GYQFKVAMAD SRRIIQVHVK IPDDSPQPKL DE