Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0653 |
Symbol | rlpA |
ID | 6143012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 664706 |
End bp | 665794 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641615543 |
Product | rare lipoprotein A |
Protein accession | YP_001742749 |
Protein GI | 170683228 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000226966 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGC AGTGGCTCGG GATCTGCATC GCGGCAGGAA TGCTCGCGGC ATGTACAAGC GATGATGGTC AGCAACAGAC GGTAAGTGTA CCGCAGCCTG CGGTATGTAA CGGCCCCATA GTTGAAATTA GCGGGGCGGA CCCGCGTTTC GAACCACTGA ACGCGACGGC AAATCAGGAT TACCAGCGCG ACGGTAAAAG CTACAAAATC GTGCAGGATC CGTCTCGATT TAGCCAGGCG GGACTGGCGG CAATCTATGA TGCCGAACCC GGCAGTAACC TGACGGCCTC TGGCGAAGCT TTCGATCCGA CACAGTTGAC GGCGGCCCAT CCAACGCTTC CGATCCCCAG CTACGCCAGA ATCACTAACC TGGCTAACGG GCGAATGATC GTGGTGCGCA TTAATGATCG CGGTCCTTAC GGCAACGACC GCGTTATTTC GCTTTCTCGC GCGGCAGCTG ACCGTCTTAA CACGTCAAAC AACACCAAAG TTCGTATCGA TCCGATTATT GTCGCCCAGG ATGGTTCGCT TTCTGGTCCT GGTATGGCCT GTACCACAGT TGCCAAACAG ACTTACGCCC TGCCTGCACC TCCCGATTTA AGCGGCGGCG CAGGAACAAG TTCAGTGTCT GGCCCGCAGG GTGACATTCT TCCGGTCAGT AATTCGACGC TAAAAAGCGA AGATCCGACT GGCGCGCCGG TAACCAGCAG CGGTTTCCTC GGCGCACCAA CGACCTTAGC GCCTGGTGTT CTGGAAGGCA GCGAACCAAC GCCTGCACCA CAGCCCGTTG TTACAGCTCC GTCGACAACG CCTGCAACCT CGCCTGCAAT GGTGACACCG CAAGCCGCCT CGCAAAGCGC CAGCGGCAAC TTTATGGTGC AAGTCGGGGC CGTTAGCGAT CAGGCTCGTG CGCAACAGTA CCAACAGCAA CTGGGACAGA AGTTCGGCGT CCCCGGTCGC GTAACTCAAA ATGGCGCGGT CTGGCGGATC CAGCTTGGCC CATTCGCCAG CAAAGCCGAA GCCAGTACCT TGCAGCAACG TTTGCAAACC GAAGCCCAAT TACAGTCATT TATTACCACC GCGCAGTAG
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Protein sequence | MRKQWLGICI AAGMLAACTS DDGQQQTVSV PQPAVCNGPI VEISGADPRF EPLNATANQD YQRDGKSYKI VQDPSRFSQA GLAAIYDAEP GSNLTASGEA FDPTQLTAAH PTLPIPSYAR ITNLANGRMI VVRINDRGPY GNDRVISLSR AAADRLNTSN NTKVRIDPII VAQDGSLSGP GMACTTVAKQ TYALPAPPDL SGGAGTSSVS GPQGDILPVS NSTLKSEDPT GAPVTSSGFL GAPTTLAPGV LEGSEPTPAP QPVVTAPSTT PATSPAMVTP QAASQSASGN FMVQVGAVSD QARAQQYQQQ LGQKFGVPGR VTQNGAVWRI QLGPFASKAE ASTLQQRLQT EAQLQSFITT AQ
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