Gene EcSMS35_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0649 
Symbol 
ID6145484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp661027 
End bp661980 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content45% 
IMG OID641615539 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001742745 
Protein GI170679981 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00471226 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGTA ATAATCAAAT TGAAACCTGT TTAAGCAGAA AGTCGTCAGA AGGTAAACCA 
CAAATATTTA CAACCTTACG AAATATTGAT CTTAACCTTC TGACTATTTT TGAAGCTGTA
TATGTACATA AAGGGATCGT TAATGCAGCG AAAGTGCTTA ATCTGACACC CTCGGCAATC
AGTCAGTCTA TTCAGAAACT GCGCGTTATA TTCCCTGACC CATTGTTTAT TCGCAAAGGC
CAGGGTGTCA CTCCTACCGC ATTTGCGATG CATCTACATG AGTATATCAG TCAGGGCCTT
GAGTCCATTC TTGGCGCGCT GGATATCGAA GGAAGCTATG ATAAGCAACG AACGATAACT
ATTGCGACCA CCCCCTCGGT CGGAGCCCTG GTCCTTCCTG TCATCTATCG GGCGATTAAA
TCTCACTATC CGCAGCTTTT ACTGCGCAAC CCACCCACCA GCGACGCGGA AAACCAACTC
AGTCAGTTTC AAACCGATCT CATCATCGAT AACATGTTTT GCACCAATCG TACGGTGCAA
CATCATGTTC TGTTCACCGA CAATATGGTG TTAATTTGCC GTGAGGGAAA TCCACTACTC
TCTTTAGAAG ATGACAGAGA GACTATCGAC AACGCTGCGC ATATACTCCT GTTACCGGAA
GGGCAAAATT TCAGCGGTCT GCGGCAGAGA GTTCAAGAGA TGTTTCCGGA CCGGCAAATC
AGTTTCACCA GCTACAACAT TTTGACAATC GCTGCACTGG TTGCCAACAG TGACATGTTA
GCGATTATTC CCAGCCGTTT TTATAACCTG TTTAGCCGTT GTTGGCCGCT AGAAAAACTG
CCTTTTCCGT CCTTAAATGA GGAGCAAATA GATTTCTCTA TCCACTACAA CAAATTCAGC
CTGCGTGATC CCATCCTGCA CGGGGTAATA GATGTTATCC GGAATGCATT TTGA
 
Protein sequence
MDSNNQIETC LSRKSSEGKP QIFTTLRNID LNLLTIFEAV YVHKGIVNAA KVLNLTPSAI 
SQSIQKLRVI FPDPLFIRKG QGVTPTAFAM HLHEYISQGL ESILGALDIE GSYDKQRTIT
IATTPSVGAL VLPVIYRAIK SHYPQLLLRN PPTSDAENQL SQFQTDLIID NMFCTNRTVQ
HHVLFTDNMV LICREGNPLL SLEDDRETID NAAHILLLPE GQNFSGLRQR VQEMFPDRQI
SFTSYNILTI AALVANSDML AIIPSRFYNL FSRCWPLEKL PFPSLNEEQI DFSIHYNKFS
LRDPILHGVI DVIRNAF