| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0648 |
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| Symbol | lipA |
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| ID | 6146008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 659853 |
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| End bp | 660818 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615538 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001742744 |
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| Protein GI | 170681300 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.017557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC CCATTGTGAT GGAACGCGGT GTTAAATACC GCGATGCCGA TAAGATGGCC
CTTATCCCGG TTAAAAACGT GGCAACAGAG CGCGAAGCCC TGCTGCGCAA GCCGGAATGG
ATGAAAATCA AGCTTCCAGC GGACTCTACA CGTATCCAGG GCATCAAAGC CGCAATGCGC
AAAAATGGCC TGCATTCTGT CTGCGAGGAA GCCTCCTGCC CTAACCTGGC GGAATGCTTC
AACCACGGCA CAGCAACTTT TATGATCCTC GGCGCTATTT GTACCCGCCG TTGTCCGTTC
TGTGACGTTG CCCACGGTCG CCCGGTAGCT CCGGATGCCA ATGAACCAGT GAAACTGGCG
CAGACCATTG CCGATATGGC GCTGCGTTAT GTGGTTATCA CCTCCGTTGA CCGTGATGAC
CTGCGCGATG GCGGTGCCCA ACACTTTGCG GATTGCATTA CTGCCATTCG GGAAAAAAGC
CCGCAAATCA AAATTGAAAC TCTGGTGCCG GATTTCCGCG GTCGTATGGA TCGTGCTCTG
GATATTCTGA CCGCCACACC ACCAGATGTG TTCAACCATA ACCTGGAAAA CGTACCGCGT
ATTTACCGTC AGGTACGGCC TGGTGCAGAT TACAACTGGT CGCTGAAGCT GCTGGAACGC
TTTAAAGAAG CGCATCCGGA AATCCCGACC AAGTCTGGTC TGATGGTGGG TCTGGGTGAA
ACCAATGAAG AAATTATTGA GGTAATGCGC GACCTGCGCC GTCATGGTGT GACGATGTTA
ACGCTGGGGC AATATTTGCA GCCAAGCCGC CATCACCTGC CGGTTCAACG TTACGTTAGC
CCGGATGAGT TCGACGAAAT GAAAGCCGAA GCGCTGGCGA TGGGCTTTAC CCATGCTGCA
TGCGGTCCGT TTGTCCGCTC GTCTTACCAC GCCGATTTGC AGGCGAAAGG GATGGAAGTT
AAGTAA
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| Protein sequence | MSKPIVMERG VKYRDADKMA LIPVKNVATE REALLRKPEW MKIKLPADST RIQGIKAAMR
KNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPVA PDANEPVKLA
QTIADMALRY VVITSVDRDD LRDGGAQHFA DCITAIREKS PQIKIETLVP DFRGRMDRAL
DILTATPPDV FNHNLENVPR IYRQVRPGAD YNWSLKLLER FKEAHPEIPT KSGLMVGLGE
TNEEIIEVMR DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PDEFDEMKAE ALAMGFTHAA
CGPFVRSSYH ADLQAKGMEV K
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