| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0640 |
|---|
| Symbol | dcuC |
|---|
| ID | 6144126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 653982 |
|---|
| End bp | 655367 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641615532 |
|---|
| Product | C4-dicarboxylate transporter DcuC |
|---|
| Protein accession | YP_001742738 |
|---|
| Protein GI | 170680591 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3069] C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00771] c4-dicarboxylate anaerobic carrier family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.907894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAT TCATTGAACT CCTTATTGGG GTTGTGGTTA TTGTGGGTGT AGCTCGCTAC
ATCATTAAAG GGTATTCCGC CACTGGCGTG TTATTTGTCG GTGGCCTGTT ATTGCTGATT
ATCAGTGCCA TTATGGGGCA CAAAGTGTTA CCGTCCAGCC AGGCTTCAAC AGGCTACAGC
GCCACGGATA TCGTTGAATA CGTTAAAATA TTGCTAATGA GCCGCGGCGG CGACCTCGGC
ATGATGATTA TGATGCTGTG TGGCTTTGCC GCTTACATGA CCCATATCGG CGCGAATGAT
ATGGTGGTCA AGCTGGCGTC AAAACCATTG CAGTATATTA ACTCCCCTTA CCTGCTGATG
ATTGCCGCCT ATTTTGTCGC CTGTCTGATG TCTCTGGCCG TCTCTTCCGC AACCGGTCTG
GGTGTTTTGC TGATGGCAAC CCTGTTTCCG GTGATGGTAA ACGTTGGTAT CAGCCGTGGT
GCAGCTGCTG CTATTTGTGC CTCCCCGGCG GCGATTATTC TCGCACCGAC TTCAGGGGAT
GTGGTGCTGG CGGCGCAGGC TTCCGAAATG TCGCTGATTG ACTTCGCCTT CAAAACGACG
CTGCCTATCT CAATTGCTGC AATTATCGGC ATGGCGATCG CCCACTTCTT CTGGCAACGT
TATCTGGATA AAAAAGAGCA CATCTCTCAT GAAATGTTAG ATGTCAGTGA AATCACCACT
ACTGCTCCTG CGTTTTATGC CATTTTGCCG TTCACGCCGA TCATCGGAGT GCTGATTTTT
GACGGCAAAT GGGGTCCGCA ATTACACATC ATCACTATTC TGGTGATTTG TATGCTGATT
GCCTCCATTC TGGAGTTCAT CCGCAGCTTT AATACCCAGA AAGTTTTCTC TGGTCTGGAA
GTGGCTTATC GCGGGATGGC CGATGCGTTT GCTAACGTGG TGATGCTGCT GGTTGCCGCT
GGGGTATTCG CTCAGGGGCT TAGCACCATC GGCTTTATTC AAAGTCTGAT TTCTATCGCC
ACCTCGTTTG GTTCGGCGAG TATCATCCTG ATGCTGGTAT TAGTGATCCT GACAATGCTG
GCGGCAGTCA CGACCGGTTC AGGCAATGCG CCGTTTTATG CGTTTGTTGA GATGATCCCG
AAACTGGCGC ACTCTTCCGG CATTAACCCG GCGTATTTGA CTATCCCAAT GCTGCAGGCG
TCAAACCTCG GCCGTACCCT GTCACCCGTT TCTGGCGTAG TCGTTGCGGT TGCCGGGATG
GCGAAAATCT CACCATTTGA AGTCGTAAAA CGCACCTCGG TGCCGGTGCT TGTTGGGCTG
GTGATTGTTA TCGTTGCTAC AGAGCTGATG GTGCCAGGAA CGGCAGCCGC GGTCACAGGC
AAGTAA
|
|---|
| Protein sequence | MLTFIELLIG VVVIVGVARY IIKGYSATGV LFVGGLLLLI ISAIMGHKVL PSSQASTGYS
ATDIVEYVKI LLMSRGGDLG MMIMMLCGFA AYMTHIGAND MVVKLASKPL QYINSPYLLM
IAAYFVACLM SLAVSSATGL GVLLMATLFP VMVNVGISRG AAAAICASPA AIILAPTSGD
VVLAAQASEM SLIDFAFKTT LPISIAAIIG MAIAHFFWQR YLDKKEHISH EMLDVSEITT
TAPAFYAILP FTPIIGVLIF DGKWGPQLHI ITILVICMLI ASILEFIRSF NTQKVFSGLE
VAYRGMADAF ANVVMLLVAA GVFAQGLSTI GFIQSLISIA TSFGSASIIL MLVLVILTML
AAVTTGSGNA PFYAFVEMIP KLAHSSGINP AYLTIPMLQA SNLGRTLSPV SGVVVAVAGM
AKISPFEVVK RTSVPVLVGL VIVIVATELM VPGTAAAVTG K
|
|---|
| |