| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0639 |
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| Symbol | dpiA |
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| ID | 6146190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 653261 |
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| End bp | 653941 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615531 |
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| Product | two-component response regulator DpiA |
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| Protein accession | YP_001742737 |
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| Protein GI | 170679964 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCTC CATTAACCCT ATTGATCGTT GAGGACGAAA CGCCGCTGGC AGAGATGCAT
GCGGAATATA TTCGTCACAT TCCCGGATTC AGTCAGATAT TACTGGCGGG AAACCTGGCG
CAGGCCCGAA TGATGATCGA GCGTTTTAAG CCGGGGCTAA TCTTGCTCGA TAACTATCTT
CCTGACGGTA GAGGGATTAA TTTACTGCAT GAACTGGTGC AGGCGCATTA TCCCGGCGAC
GTGGTGTTTA CCACTGCAGC CAGCGATATG GAAACGGTGT CTGAAGCCGT ACGTTGTGGT
GTATTTGATT ATCTCATTAA GCCCATTGCC TATGAACGGC TGGGGCAAAC GCTAACCCGT
TTCCGCCAGC GTAAACATAT GCTGGAAAGT ATTGATAGCG CCAGCCAGAA GCAAATTGAT
GAGATGTTTA ATGCCTATGC TCGCGGTGAA CCCAAAGACG AACTGCCGAC CGGCATTGAC
CCCTTGACGC TAAACGCAGT GCGAAAACTG TTTAAAGAGC CTGGTGTGCA ACATACGGCA
GAAACGGTGG CGCAGGCACT GACTATCAGC CGCACCACTG CCAGACGTTA TCTTGAATAT
TGCGCCAGCC GCCATCTGAT TATTGCTGAA ATTGTTCACG GCAAAGTTGG CAGACCGCAA
CGCATATACC ACAGTGGGTG A
|
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| Protein sequence | MTAPLTLLIV EDETPLAEMH AEYIRHIPGF SQILLAGNLA QARMMIERFK PGLILLDNYL
PDGRGINLLH ELVQAHYPGD VVFTTAASDM ETVSEAVRCG VFDYLIKPIA YERLGQTLTR
FRQRKHMLES IDSASQKQID EMFNAYARGE PKDELPTGID PLTLNAVRKL FKEPGVQHTA
ETVAQALTIS RTTARRYLEY CASRHLIIAE IVHGKVGRPQ RIYHSG
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