Gene EcSMS35_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0635 
SymbolcitE 
ID6143274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp648981 
End bp649889 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID641615527 
Productcitrate (pro-3S)-lyase, beta subunit 
Protein accessionYP_001742733 
Protein GI170681923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG CTTCGCTGCA ACAACGTAAA ACTCGCACCC GCCGCAGCAT GCTGTTTGTG 
CCAGGTGCCA ATGCCGCGAT GGTCAGCAAC TCATTCATCT ACCCGGCTGA TGCCCTGATG
TTTGACCTCG AAGACTCCGT GGCATTGCGT GAAAAAGACA CCGCCCGCCG CATGGTTTAC
CACGCGCTGC AACATCCGCT GTATCGCGAT ATTGAAACCA TTGTGCGTGT AAACGCGCTG
GATTCCGAAT GGGGTGTTAA CGACCTGGAA GCCGTCGTTC GCGGTGGTGC GGACGTTGTG
CGTCTGCCGA AAACCGATAC CGCTCAGGAT GTTCTGGATA TCGAAAAAGA GATCCTGCGC
ATCGAAAAAG CCTGTGGTCG TGAACCCGGC AGCACCGGCC TGCTGGCAGC GATTGAATCT
CCGCTGGGCA TTACCCGCGC AGTGGAAATC GCTCACGCTT CCGAGCGTTT GATCGGTATC
GCCCTCGGTG CAGAAGACTA TGTGCGCAAC CTGCGTACAG AACGCTCCCC GGAAGGAACT
GAACTGCTGT TCGCACGCTG CTCCATTTTG CAGGCCGCGC GCTCTGCGGG TATTCAGGCG
TTCGATACCG TCTATTCCGA CGCTAACAAC GAAGCCGGAT TCCTGCAAGA AGCCGCCCAC
ATCAAACAGC TGGGCTTTGA CGGCAAATCG CTGATCAACC CGCGTCAGAT TGATCTGCTG
CACAACCTCT ACGCACCGAC TCAGAAAGAA GTGGATCACG CCCGCCGCGT CGTAGAAGCC
GCTGAAGCCG CCGCTCGCGA AGGCCTCGGC GTGGTTTCCC TGAACGGCAA GATGGTGGAC
GGTCCGGTTA TCGATCGCGC CCGTCTGGTG CTCTCCCGTG CAGAACTTTC CGGCATCCGC
GAAGAATAA
 
Protein sequence
MISASLQQRK TRTRRSMLFV PGANAAMVSN SFIYPADALM FDLEDSVALR EKDTARRMVY 
HALQHPLYRD IETIVRVNAL DSEWGVNDLE AVVRGGADVV RLPKTDTAQD VLDIEKEILR
IEKACGREPG STGLLAAIES PLGITRAVEI AHASERLIGI ALGAEDYVRN LRTERSPEGT
ELLFARCSIL QAARSAGIQA FDTVYSDANN EAGFLQEAAH IKQLGFDGKS LINPRQIDLL
HNLYAPTQKE VDHARRVVEA AEAAAREGLG VVSLNGKMVD GPVIDRARLV LSRAELSGIR
EE