| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0627 |
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| Symbol | ahpF |
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| ID | 6146440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 640457 |
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| End bp | 642052 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615519 |
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| Product | alkyl hydroperoxide reductase subunit F |
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| Protein accession | YP_001742725 |
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| Protein GI | 170682192 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGT TTAAAGCCCA GGAGATAAAC ATGCTCGACA CAAATATGAA AACTCAACTC
AAGGCTTACC TTGAGAAATT GACCAAGCCT GTTGAGTTAA TTGCCACGCT GGATGACAGC
GCTAAATCGG CAGAAATCAA GGAACTGTTG GCTGAAATCG CAGAACTGTC AGACAAAGTC
ACCTTTAAAG AAGATAACAG CTTGCCAGTG CGTAAGCCGT CTTTCCTGAT CACCAACCCA
GGTTCCAACC AGGGACCACG TTTTGCAGGC TCCCCGCTGG GCCACGAGTT CACCTCGCTG
GTACTGGCGT TGCTGTGGAC CGGTGGTCAT CCGTCGAAAG AAGCGCAGTC TCTGCTGGAG
CAGATTCGCC ATATTGACGG TGATTTTGAA TTCGAAACCT ATTACTCGCT CTCTTGCCAC
AACTGCCCGG ACGTGGTGCA GGCGCTGAAC CTGATGAGCG TACTGAACCC GCGCATCAAG
CACACTGCAA TTGACGGCGG CACCTTCCAG AACGAAATCA CCGATCGCAA CGTGATGGGC
GTTCCGGCAG TGTTCGTAAA CGGGAAAGAG TTTGGTCAGG GCCGCATGAC GTTGACTGAA
ATCGTTGCCA AAATTGATAC GGGTGCGGAA AAACGTGCGG CAGAAGAGCT GAACAAGCGT
GATGCTTATG ACGTATTAAT CGTTGGTTCC GGCCCGGCGG GTGCAGCGGC AGCAATTTAC
TCCGCACGTA AAGGCATCCG TACCGGTCTG ATGGGCGAAC GTTTTGGTGG TCAGATCCTC
GATACCGTTG ATATCGAAAA CTACATTTCT GTACCGAAGA CCGAAGGCCA GAAACTGGCA
GGTGCGCTGA AAGTTCATGT TGATGAATAC GACGTTGATG TGATCGACAG CCAGAGCGCG
AGCAAACTGA TCCCGGCAGC GGTTGAAGGC GGCCTGCATC AGATTGAAAC AGCTTCTGGC
GCGGTACTGA AAGCACGCAG CATTATCGTG GCGACCGGTG CAAAATGGCG CAACATGAAC
GTTCCTGGCG AAGATCAGTA TCGCACCAAA GGCGTGACCT ACTGCCCGCA CTGCGACGGC
CCGCTGTTTA AAGGCAAACG CGTAGCGGTT ATCGGCGGCG GTAACTCCGG CGTGGAAGCG
GCAATTGACC TGGCGGGTAT CGTTGAGCAC GTAACGCTGC TGGAATTTGC GCCAGAAATG
AAAGCCGACC AGGTTCTGCA GGACAAACTG CGCAGCCTGA AAAACGTCGA CATTATTCTG
AATGCGCAAA CCACGGAAGT GAAAGGCGAC GGTAGCAAAG TCGTAGGTCT GGAATATCGC
GATCGTGTCA GCGGCGATAT TCACAACATC GAACTGGCCG GTATTTTCGT CCAGATTGGT
CTGCTGCCGA ACACCAACTG GCTGGAAGGC GCAGTCGAAC GTAACCGCAT GGGCGAGATT
ATCATTGATG CGAAATGCGA AACCAACGTC AAAGGCGTGT TCGCAGCGGG TGACTGTACG
ACGGTTCCGT ACAAGCAGAT CATCATCGCT ACTGGCGAAG GTGCCAAAGC CTCTCTGAGT
GCTTTTGACT ACCTGATTCG CACCAAAACT GCATAA
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| Protein sequence | MMMFKAQEIN MLDTNMKTQL KAYLEKLTKP VELIATLDDS AKSAEIKELL AEIAELSDKV
TFKEDNSLPV RKPSFLITNP GSNQGPRFAG SPLGHEFTSL VLALLWTGGH PSKEAQSLLE
QIRHIDGDFE FETYYSLSCH NCPDVVQALN LMSVLNPRIK HTAIDGGTFQ NEITDRNVMG
VPAVFVNGKE FGQGRMTLTE IVAKIDTGAE KRAAEELNKR DAYDVLIVGS GPAGAAAAIY
SARKGIRTGL MGERFGGQIL DTVDIENYIS VPKTEGQKLA GALKVHVDEY DVDVIDSQSA
SKLIPAAVEG GLHQIETASG AVLKARSIIV ATGAKWRNMN VPGEDQYRTK GVTYCPHCDG
PLFKGKRVAV IGGGNSGVEA AIDLAGIVEH VTLLEFAPEM KADQVLQDKL RSLKNVDIIL
NAQTTEVKGD GSKVVGLEYR DRVSGDIHNI ELAGIFVQIG LLPNTNWLEG AVERNRMGEI
IIDAKCETNV KGVFAAGDCT TVPYKQIIIA TGEGAKASLS AFDYLIRTKT A
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