Gene EcSMS35_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0623 
Symbol 
ID6143010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp636203 
End bp637423 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID641615515 
Productphosphoadenosine phosphosulfate reductase family protein 
Protein accessionYP_001742721 
Protein GI170680017 
COG category[R] General function prediction only 
COG ID[COG3969] Predicted phosphoadenosine phosphosulfate sulfotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT ATAAAATCCC GCTTCCACTG AATATTCTGG AAGCTGCAAA AGAACGTATT 
ACCTGGACAC TTAATACCCT ACCCCGTATC TGTGTTTCTT TTTCGGGTGG TAAAGATTCC
GGATTAATGC TGCATCTGAC CGCCGAAATT GCCCGACAAA TGGGCAAAAA AATCTGCGTT
TTGTTTATCG ACTGGGAAGC GCAGTTCTCA TGCACTATTA ACTATGTTCA GTCATTACGT
GAGTTTTACG CCGATGTCAT CGAAGAGTTT TACTGGGTTG CGCTCCCGCT TACGACGCAA
AATTCCCTTT CTCAATACCA ACCCGAATGG CAGTGCTGGG AACCTGATGT CGAATGGGTA
CGTCAGCCCC CGCAAGATGC GATAACCGAT CCTGACTTTT TCTCCTTTTA CCAGCCTGGC
ATGACCTTCG AACAATTTGT GCGTGAGTTT GCCGAATGGT TTTCGCAAAA ACGTCCGGCG
GCGATGATGA TCGGCATCCG TGCGGATGAG TCCTACAACC GTTTTGTCGC CATCGCCAGT
TTAAATAAAC AACGTTTTGC CGATGATAAG CCCTGGACTA CTGCCGCACC AGGCGGTCAT
AGCTGGTACA TTTACCCCAT CTACGACTGG AAAGTCGCTG ATATCTGGAC CTGGTATGCT
AACCATCAAC AGCTCTGTAA CCCACTGTAT AATATAATGT ATCAGGCAGG CGTTCCTCTG
CGTCATATGC GAATTTGCGA ACCTTTTGGC CCGGAGCAAC GGCAAGGATT ATGGCTCTAT
CACGTTATCG AACCGGATCG CTGGGCTGCT ATGTGCGCAC GAGTCAGCGG GGTAAAAAGT
GGCGGCATTT ACGCCGGACA TGATAATCAT TTTTATGGTC ATCGGAAAAT CCTCAAGCCA
GAACATTTAG ACTGGCAAGA ATATGCATTA TTGCTGCTCA ATAGCATGCC GGAAAAAACA
GCTGAGCATT ACCGCAATAA AATCGCCATT TATTTGCACT GGTATCAGAA AAAAGGCATC
GAAGTTCCAC AAACCCAGCA AGGGGACATT GGCGCGAAAG ATATCCCCTC CTGGCGGCGA
ATATGCAAAG TTTTACTCAA TAACGATTAC TGGTGCCGGG CATTATCATT TAGTCCTACG
AAAGCGAAGA ACTATCAGCG TTATAACGAA CGGATAAAAG GAAAACGTCA GGAATGGGGG
ATACTATGCA ACAACGATTA A
 
Protein sequence
MSIYKIPLPL NILEAAKERI TWTLNTLPRI CVSFSGGKDS GLMLHLTAEI ARQMGKKICV 
LFIDWEAQFS CTINYVQSLR EFYADVIEEF YWVALPLTTQ NSLSQYQPEW QCWEPDVEWV
RQPPQDAITD PDFFSFYQPG MTFEQFVREF AEWFSQKRPA AMMIGIRADE SYNRFVAIAS
LNKQRFADDK PWTTAAPGGH SWYIYPIYDW KVADIWTWYA NHQQLCNPLY NIMYQAGVPL
RHMRICEPFG PEQRQGLWLY HVIEPDRWAA MCARVSGVKS GGIYAGHDNH FYGHRKILKP
EHLDWQEYAL LLLNSMPEKT AEHYRNKIAI YLHWYQKKGI EVPQTQQGDI GAKDIPSWRR
ICKVLLNNDY WCRALSFSPT KAKNYQRYNE RIKGKRQEWG ILCNND