Gene EcSMS35_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0592 
SymbolcusB 
ID6144322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp599963 
End bp601186 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content56% 
IMG OID641615484 
Productcopper/silver efflux system membrane fusion protein CusB 
Protein accessionYP_001742690 
Protein GI170684052 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.50273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCGCTTAT TATCGGCAGC ATGATCGCGG GCGGTATTAT TTCTGCGGCA 
GGTTTTACCT GGTTTGCAAA GGCTGAACCG CCCGCAGAAA AAACGCCGAC CGCAGAACGT
AAAATCTTAT TCTGGTACGA CCCGATGTAT CCCAATACGC GGTTCGATAA ACCAGGTAAA
TCGCCGTTTA TGGATATGGA TCTGGTGCCG AAATATGCCG ATGAAGAGAG TTCTGCGTCT
GGTGTACGCA TTGACCCGAC CCAGACGCAG AATCTGGGGG TGAAAACGGC GACCGTCACG
CGCGGGCCGC TGACTTTTGC CCAGAGTTTC CCGGCGAATG TCAGTTACAA CGAGTATCAG
TATGCCATTG TGCAGGCTCG CGCTGCCGGG TTTATCGACA AGGTGTATCC GCTTACCGTG
GGCGATAAAG TACAAAAGGG CACACCGCTT CTCGACCTGA CCATTCCCGA CTGGGTGGAA
GCGCAGAGTG AGTATTTACT GCTGCGCGAA ACCGGCGGTA CGGCGACCCA GACTGAAGGC
ATTCTTGAGC GGCTGAGACT GGCGGGAATG CCGGAGGCGG ATATTCGCCG CCTGATCGCC
ACGCAAAAAA TCCAGACTCG CTTTACGCTC AAAGCGCCCA TTGATGGCGT GATCACCGCG
TTTGATCTGC GCGCGGGAAT GAATATCGCC AAAGATAACG TGGTCGCGAA AATTCAGGGT
ATGGACCCGG TGTGGGTCAC TGCTGCGATC CCGGAGTCCA TCGCCTGGCT GGTGAAAGAT
GCCTCGCAGT TTACCCTCAC CGTTCCGGCG CGACCGGATA AAACACTCAC CATTCGCAAA
TGGACCCTGC TACCCGGCGT GGATGCCGCG ACCCGCACGC TACAACTGCG TCTGGAAGTC
GACAACGCCG ACGAGGCGCT AAAACCGGGC ATGAACGCCT GGTTGCAACT CAATACCGCC
AGCGAACCGA TGCTGCTCAT TCCGTCACAG GCGCTGATTG ATACCGGCAA CGAACAGCGG
GTGATTACCG TTGATGCTGA CGGGCGCTTT GTACCGAAAC GCGTTGCCGT TTTCCAGGCA
TCGCAAGGCG TCACCGCGTT ACGCTCTGGT CTGGCGGAAG GTGAAAAGGT GGTTTCCAGC
GGCCTGTTCC TGATTGATTC TGAAGCCAAT ATTTCTGGCG CACTGGAGCG GATGCGCTCT
GAAAGTGCTA CCCATGCGCA TTGA
 
Protein sequence
MKKIALIIGS MIAGGIISAA GFTWFAKAEP PAEKTPTAER KILFWYDPMY PNTRFDKPGK 
SPFMDMDLVP KYADEESSAS GVRIDPTQTQ NLGVKTATVT RGPLTFAQSF PANVSYNEYQ
YAIVQARAAG FIDKVYPLTV GDKVQKGTPL LDLTIPDWVE AQSEYLLLRE TGGTATQTEG
ILERLRLAGM PEADIRRLIA TQKIQTRFTL KAPIDGVITA FDLRAGMNIA KDNVVAKIQG
MDPVWVTAAI PESIAWLVKD ASQFTLTVPA RPDKTLTIRK WTLLPGVDAA TRTLQLRLEV
DNADEALKPG MNAWLQLNTA SEPMLLIPSQ ALIDTGNEQR VITVDADGRF VPKRVAVFQA
SQGVTALRSG LAEGEKVVSS GLFLIDSEAN ISGALERMRS ESATHAH