| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0569 |
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| Symbol | lpxH |
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| ID | 6146506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 577123 |
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| End bp | 577845 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615461 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_001742668 |
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| Protein GI | 170682091 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000104909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGACAC TCTTTATTGC AGATCTTCAT CTCTGCGTGG AAGAACCGGC GATCACCGCC
GGTTTTCTGC GTTTTTTAGC GGGGGAAGCC CGCAAGGCCG ACGCGCTGTA TATTCTTGGC
GATCTGTTTG AAGCGTGGAT TGGCGACGAC GATCCCAACC CACTCCATCG CCAGATGGCG
GCAGCGATCA AAGCGGTGTC CGATTCCGGC GTTCCCTGTT ATTTCATTCA TGGCAACCGT
GATTTTCTGC TCGGCAAACG CTTTGCCCGT GAAAGCGGCA TGACGTTATT GCCGGAAGAA
AAGGTGCTCG AACTTTATGG TCGTCGGGTG TTGATTATGC ATGGCGACAC GCTGTGCACC
GATGACGCCG GTTATCAGGC TTTTCGCGCC AAAGTCCACA AGCCGTGGCT GCAAACGCTA
TTCCTCGCCC TGCCGTTGTT TGTGCGCAAA CGCATTGCCG CGCGAATGCG AGCGAACAGC
AAAGAAGCCA ACAGCAGTAA ATCGCTGGCG ATCATGGACG TTAACCAAAA CGCGGTGGTC
AGTGCGATGG AAAAACATCA GGTGCAATGG CTGATTCACG GGCATACCCA TCGCCCGGCA
GTACATGAAC TTATCGCCAA TCAGCAACCT GCTTTCCGCG TCGTGCTGGG TGCCTGGCAT
ACGGAAGGTT CAATGGTGAA AGTCACGGCG GATGACGTTG AGCTGATTCA TTTTCCGTTT
TAA
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| Protein sequence | MATLFIADLH LCVEEPAITA GFLRFLAGEA RKADALYILG DLFEAWIGDD DPNPLHRQMA
AAIKAVSDSG VPCYFIHGNR DFLLGKRFAR ESGMTLLPEE KVLELYGRRV LIMHGDTLCT
DDAGYQAFRA KVHKPWLQTL FLALPLFVRK RIAARMRANS KEANSSKSLA IMDVNQNAVV
SAMEKHQVQW LIHGHTHRPA VHELIANQQP AFRVVLGAWH TEGSMVKVTA DDVELIHFPF
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