Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0559 |
Symbol | |
ID | 6142744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 565854 |
End bp | 566999 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641615451 |
Product | glycerate kinase II |
Protein accession | YP_001742658 |
Protein GI | 170680619 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG TCATTGCGCC AGACTCTTTT AAAGAGAGCT TAAGTGCAGA AAAATGTTGT CAGGCAATTA AAGCCGGGTT TTCGACCATA TTTCCCGATG CGCACTATAT CTGTTTGCCG ATAGCGGATG GCGGCGAAGG GACGGTGGAG GCGATGGTCG CCGCGACGGG CGGTAACATC GTGAAGCTTG AAGTCTGCGG GCCGATGGGC GAAAAAGTGA ATGCTTTTTA TGGACTTACC GGCGACGGGA AAACGGCAGT GATTGAGATG GCGGCAGCAA GTGGCCTGAT GCTGGTCGCG CCTGAAAAGC GTAATCCGTT GCTGGCCTCC AGTTTTGGTA CGGGGGAGTT AATTCGCCAT GCGCTGGATA ACGGCATTCG CCATATTATT CTCGGCATTG GCGGCAGTGC GACGGTCGAC GGCGGTATGG GCATGGCGCA GGCGCTCGGT GTGCGTTTCC TTGATGCCGA CGGTCAGCCG CTGGCGGCTA ACGGCGGCAA TTTAGCGCGG GTGGCAAGTA TTGAGATGAA TGAATGCGAT CCGCGTCTGG CGAACTGTCA TATTGAAGTA GCATGTGACG TTGATAACCC GCTGGTAGGG GCACGCGGCG CGGCGGCGGT GTTTGGTCCG CAAAAAGGGG CAACGCCGGA AATGGTCGAA GAACTGGAAC AGGGGCTGCA AAATTACGCC CGTGTTTTAC AACAGCTAAC TGAAATCAAC GTCTGCCAGA TGGCGGGTGG CGGCGCGGCG GGCGGTATGG GCATTGCGGC GGCGGTATTC CTCAATGCGG ATATTAAACC GGGTATTGAG ATTGTACTGC GGGCGGTCAA CCTGGAGCAG GCGGTGCAGG GTGCAGCGCT GGTGATCACC GGGGAAGGGC GCATCGATTC GCAAACGGCA GGTGGTAAAG CGCCGCTGGG CGTGGCGTCG GTGGCGAAGC AGTTTAATGT CCCGGTGATT GGGATTGCTG GCGTATTGGG TGATGGCGTG GAAGTGGTGC ACCAGTACGG CATTGACGCG GTGTTCAGCA TTTTGCCACG TCTGGCACCT TTAGCCGAAG TGCTCGCCAG CGGTGAAACC AATCTCTTCA ACAGCGCACG AAATATTGCC TGCGCCATTA AAATAGGTCA GGGAATTAAA AACTGA
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Protein sequence | MKIVIAPDSF KESLSAEKCC QAIKAGFSTI FPDAHYICLP IADGGEGTVE AMVAATGGNI VKLEVCGPMG EKVNAFYGLT GDGKTAVIEM AAASGLMLVA PEKRNPLLAS SFGTGELIRH ALDNGIRHII LGIGGSATVD GGMGMAQALG VRFLDADGQP LAANGGNLAR VASIEMNECD PRLANCHIEV ACDVDNPLVG ARGAAAVFGP QKGATPEMVE ELEQGLQNYA RVLQQLTEIN VCQMAGGGAA GGMGIAAAVF LNADIKPGIE IVLRAVNLEQ AVQGAALVIT GEGRIDSQTA GGKAPLGVAS VAKQFNVPVI GIAGVLGDGV EVVHQYGIDA VFSILPRLAP LAEVLASGET NLFNSARNIA CAIKIGQGIK N
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