Gene EcSMS35_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0559 
Symbol 
ID6142744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp565854 
End bp566999 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content56% 
IMG OID641615451 
Productglycerate kinase II 
Protein accessionYP_001742658 
Protein GI170680619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TCATTGCGCC AGACTCTTTT AAAGAGAGCT TAAGTGCAGA AAAATGTTGT 
CAGGCAATTA AAGCCGGGTT TTCGACCATA TTTCCCGATG CGCACTATAT CTGTTTGCCG
ATAGCGGATG GCGGCGAAGG GACGGTGGAG GCGATGGTCG CCGCGACGGG CGGTAACATC
GTGAAGCTTG AAGTCTGCGG GCCGATGGGC GAAAAAGTGA ATGCTTTTTA TGGACTTACC
GGCGACGGGA AAACGGCAGT GATTGAGATG GCGGCAGCAA GTGGCCTGAT GCTGGTCGCG
CCTGAAAAGC GTAATCCGTT GCTGGCCTCC AGTTTTGGTA CGGGGGAGTT AATTCGCCAT
GCGCTGGATA ACGGCATTCG CCATATTATT CTCGGCATTG GCGGCAGTGC GACGGTCGAC
GGCGGTATGG GCATGGCGCA GGCGCTCGGT GTGCGTTTCC TTGATGCCGA CGGTCAGCCG
CTGGCGGCTA ACGGCGGCAA TTTAGCGCGG GTGGCAAGTA TTGAGATGAA TGAATGCGAT
CCGCGTCTGG CGAACTGTCA TATTGAAGTA GCATGTGACG TTGATAACCC GCTGGTAGGG
GCACGCGGCG CGGCGGCGGT GTTTGGTCCG CAAAAAGGGG CAACGCCGGA AATGGTCGAA
GAACTGGAAC AGGGGCTGCA AAATTACGCC CGTGTTTTAC AACAGCTAAC TGAAATCAAC
GTCTGCCAGA TGGCGGGTGG CGGCGCGGCG GGCGGTATGG GCATTGCGGC GGCGGTATTC
CTCAATGCGG ATATTAAACC GGGTATTGAG ATTGTACTGC GGGCGGTCAA CCTGGAGCAG
GCGGTGCAGG GTGCAGCGCT GGTGATCACC GGGGAAGGGC GCATCGATTC GCAAACGGCA
GGTGGTAAAG CGCCGCTGGG CGTGGCGTCG GTGGCGAAGC AGTTTAATGT CCCGGTGATT
GGGATTGCTG GCGTATTGGG TGATGGCGTG GAAGTGGTGC ACCAGTACGG CATTGACGCG
GTGTTCAGCA TTTTGCCACG TCTGGCACCT TTAGCCGAAG TGCTCGCCAG CGGTGAAACC
AATCTCTTCA ACAGCGCACG AAATATTGCC TGCGCCATTA AAATAGGTCA GGGAATTAAA
AACTGA
 
Protein sequence
MKIVIAPDSF KESLSAEKCC QAIKAGFSTI FPDAHYICLP IADGGEGTVE AMVAATGGNI 
VKLEVCGPMG EKVNAFYGLT GDGKTAVIEM AAASGLMLVA PEKRNPLLAS SFGTGELIRH
ALDNGIRHII LGIGGSATVD GGMGMAQALG VRFLDADGQP LAANGGNLAR VASIEMNECD
PRLANCHIEV ACDVDNPLVG ARGAAAVFGP QKGATPEMVE ELEQGLQNYA RVLQQLTEIN
VCQMAGGGAA GGMGIAAAVF LNADIKPGIE IVLRAVNLEQ AVQGAALVIT GEGRIDSQTA
GGKAPLGVAS VAKQFNVPVI GIAGVLGDGV EVVHQYGIDA VFSILPRLAP LAEVLASGET
NLFNSARNIA CAIKIGQGIK N